RNA–Protein interactions for RNA: ENST00000490478.5

CACNA2D3-210, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-210ENST00000490478 PELP1Q8IZL8 1130 aaKnown RBP12.13□□□□□ -0.47
CACNA2D3-210ENST00000490478 HRCP23327 699 aa11.88□□□□□ -0.51
CACNA2D3-210ENST00000490478 MYT1Q01538 1121 aa11.78□□□□□ -0.52
CACNA2D3-210ENST00000490478 PPARGC1BQ86YN6 1023 aaKnown RBP11.68□□□□□ -0.54
CACNA2D3-210ENST00000490478 SCAF1Q9H7N4 1312 aaKnown RBP11.58□□□□□ -0.56
CACNA2D3-210ENST00000490478 SLC24A1O60721 1099 aa11.49□□□□□ -0.57
CACNA2D3-210ENST00000490478 NISCHQ9Y2I1 1504 aa11.42□□□□□ -0.58
CACNA2D3-210ENST00000490478 PCGF6Q9BYE7 350 aa11.38□□□□□ -0.59
CACNA2D3-210ENST00000490478 TTBK1Q5TCY1 1321 aaPredicted RBP11.21□□□□□ -0.61
CACNA2D3-210ENST00000490478 MYO15BQ96JP2 1530 aa11.18□□□□□ -0.62
CACNA2D3-210ENST00000490478 BCL11AQ9H165 835 aa11.1□□□□□ -0.63
CACNA2D3-210ENST00000490478 PRKCSHP14314 528 aaPredicted RBP11.1□□□□□ -0.63
CACNA2D3-210ENST00000490478 ACIN1Q9UKV3 1341 aaKnown RBP11.07□□□□□ -0.64
CACNA2D3-210ENST00000490478 NEUROD1Q13562 356 aa11.05□□□□□ -0.64
CACNA2D3-210ENST00000490478 FAM9AQ8IZU1 332 aaPredicted RBP11.04□□□□□ -0.64
CACNA2D3-210ENST00000490478 GTF3C3Q9Y5Q9 886 aa11.02□□□□□ -0.65
CACNA2D3-210ENST00000490478 CHIC1Q5VXU3 224 aa10.92□□□□□ -0.66
CACNA2D3-210ENST00000490478 CENPBP07199 599 aaPredicted RBP10.89□□□□□ -0.67
CACNA2D3-210ENST00000490478 ZEB1P37275 1124 aaPredicted RBP10.87□□□□□ -0.67
CACNA2D3-210ENST00000490478 DCAF1Q9Y4B6 1507 aa10.86□□□□□ -0.67
CACNA2D3-210ENST00000490478 CCDC180Q9P1Z9 1646 aa10.83□□□□□ -0.67
CACNA2D3-210ENST00000490478 TRIM26Q12899 539 aaPredicted RBP10.83□□□□□ -0.68
CACNA2D3-210ENST00000490478 SUPT5HO00267 1087 aaKnown RBP10.76□□□□□ -0.69
CACNA2D3-210ENST00000490478 ANP32EQ9BTT0 268 aa10.72□□□□□ -0.69
CACNA2D3-210ENST00000490478 APLP2Q06481 763 aa10.7□□□□□ -0.7
CACNA2D3-210ENST00000490478 AEBP2Q6ZN18 517 aaPredicted RBP10.69□□□□□ -0.7
CACNA2D3-210ENST00000490478 ERICH6Q7L0X2 663 aa10.68□□□□□ -0.7
CACNA2D3-210ENST00000490478 CSRNP3Q8WYN3 585 aa10.67□□□□□ -0.7
CACNA2D3-210ENST00000490478 LOC105371045A0A1W2PR82 267 aa10.64□□□□□ -0.71
CACNA2D3-210ENST00000490478 SHROOM4Q9ULL8 1493 aa10.62□□□□□ -0.71
CACNA2D3-210ENST00000490478 DIEXFQ68CQ4 756 aaKnown RBP10.58□□□□□ -0.72
CACNA2D3-210ENST00000490478 EHMT2Q96KQ7 1210 aa10.54□□□□□ -0.72
CACNA2D3-210ENST00000490478 YTHDC1Q96MU7 727 aaKnown RBP10.5□□□□□ -0.73
CACNA2D3-210ENST00000490478 TSHZ2Q9NRE2 1034 aa10.48□□□□□ -0.73
CACNA2D3-210ENST00000490478 DAXXQ9UER7 740 aaPredicted RBP10.46□□□□□ -0.73
CACNA2D3-210ENST00000490478 ANO8Q9HCE9 1232 aaPredicted RBP10.39□□□□□ -0.75
CACNA2D3-210ENST00000490478 TRIM41Q8WV44 630 aa10.38□□□□□ -0.75
CACNA2D3-210ENST00000490478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.37□□□□□ -0.75
CACNA2D3-210ENST00000490478 SUPT16HQ9Y5B9 1047 aaKnown RBP10.36□□□□□ -0.75
CACNA2D3-210ENST00000490478 PLPPR3Q6T4P5 718 aa10.36□□□□□ -0.75
CACNA2D3-210ENST00000490478 CCER1Q8TC90 406 aaPredicted RBP10.31□□□□□ -0.76
CACNA2D3-210ENST00000490478 MIER1Q8N108 512 aa10.3□□□□□ -0.76
CACNA2D3-210ENST00000490478 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.76
CACNA2D3-210ENST00000490478 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
CACNA2D3-210ENST00000490478 NCBP3Q53F19 620 aaKnown RBP10.21□□□□□ -0.78
CACNA2D3-210ENST00000490478 SALL2Q9Y467 1007 aaPredicted RBP10.2□□□□□ -0.78
CACNA2D3-210ENST00000490478 CLSPNQ9HAW4 1339 aa10.2□□□□□ -0.78
CACNA2D3-210ENST00000490478 MSH5O43196 834 aa10.18□□□□□ -0.78
CACNA2D3-210ENST00000490478 UBE2Q2Q8WVN8 375 aa10.18□□□□□ -0.78
CACNA2D3-210ENST00000490478 CCDC136Q96JN2 1154 aa10.17□□□□□ -0.78
CACNA2D3-210ENST00000490478 RBM19Q9Y4C8 960 aaKnown RBP10.16□□□□□ -0.78
CACNA2D3-210ENST00000490478 DEKP35659 375 aaKnown RBP10.09□□□□□ -0.79
CACNA2D3-210ENST00000490478 BCANQ96GW7 911 aa10.08□□□□□ -0.8
CACNA2D3-210ENST00000490478 EIF5BO60841 1220 aaKnown RBP10.05□□□□□ -0.8
CACNA2D3-210ENST00000490478 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.01□□□□□ -0.81
CACNA2D3-210ENST00000490478 ERICH6BQ5W0A0 696 aa10□□□□□ -0.81
CACNA2D3-210ENST00000490478 PLEKHG5O94827 1062 aa9.98□□□□□ -0.81
CACNA2D3-210ENST00000490478 MYT1LQ9UL68 1186 aa9.97□□□□□ -0.81
CACNA2D3-210ENST00000490478 FKBP8Q14318 412 aa9.95□□□□□ -0.82
CACNA2D3-210ENST00000490478 FANCIQ9NVI1 1328 aa9.95□□□□□ -0.82
CACNA2D3-210ENST00000490478 AMER1Q5JTC6 1135 aaPredicted RBP9.95□□□□□ -0.82
CACNA2D3-210ENST00000490478 PKNOX2Q96KN3 472 aa9.94□□□□□ -0.82
CACNA2D3-210ENST00000490478 ITGAEP38570 1179 aa9.94□□□□□ -0.82
CACNA2D3-210ENST00000490478 IL27Q8NEV9 243 aa9.93□□□□□ -0.82
CACNA2D3-210ENST00000490478 PHF23Q9BUL5 403 aaPredicted RBP9.87□□□□□ -0.83
CACNA2D3-210ENST00000490478 KCNA4P22459 653 aa9.85□□□□□ -0.83
CACNA2D3-210ENST00000490478 KCNH8Q96L42 1107 aa9.85□□□□□ -0.83
CACNA2D3-210ENST00000490478 NBR1Q14596 966 aa9.83□□□□□ -0.84
CACNA2D3-210ENST00000490478 PODXL2Q9NZ53 605 aa9.81□□□□□ -0.84
CACNA2D3-210ENST00000490478 ZCCHC6Q5VYS8 1495 aaKnown RBP9.81□□□□□ -0.84
CACNA2D3-210ENST00000490478 ARXQ96QS3 562 aa9.81□□□□□ -0.84
CACNA2D3-210ENST00000490478 TIMELESSQ9UNS1 1208 aa9.77□□□□□ -0.85
CACNA2D3-210ENST00000490478 PAK3O75914 559 aaPredicted RBP9.75□□□□□ -0.85
CACNA2D3-210ENST00000490478 NEFLP07196 543 aa9.75□□□□□ -0.85
CACNA2D3-210ENST00000490478 CDK11AQ9UQ88 783 aaPredicted RBP9.72□□□□□ -0.85
CACNA2D3-210ENST00000490478 NOP58Q9Y2X3 529 aaKnown RBP9.71□□□□□ -0.85
CACNA2D3-210ENST00000490478 WRNQ14191 1432 aaPredicted RBP eCLIP9.66□□□□□ -0.86
CACNA2D3-210ENST00000490478 ZMYND15Q9H091 742 aa9.66□□□□□ -0.86
CACNA2D3-210ENST00000490478 HNRNPUL2Q1KMD3 747 aaKnown RBP9.65□□□□□ -0.87
CACNA2D3-210ENST00000490478 RTL5Q5HYW3 569 aaPredicted RBP9.64□□□□□ -0.87
CACNA2D3-210ENST00000490478 IRX6P78412 446 aaPredicted RBP9.62□□□□□ -0.87
CACNA2D3-210ENST00000490478 TRIM52Q96A61 297 aa9.62□□□□□ -0.87
CACNA2D3-210ENST00000490478 C11orf95C9JLR9 678 aaPredicted RBP9.62□□□□□ -0.87
CACNA2D3-210ENST00000490478 BRPF3Q9ULD4 1205 aa9.61□□□□□ -0.87
CACNA2D3-210ENST00000490478 WASHC2AQ641Q2 1341 aa9.61□□□□□ -0.87
CACNA2D3-210ENST00000490478 TULP1O00294 542 aaPredicted RBP9.6□□□□□ -0.87
CACNA2D3-210ENST00000490478 VSIG10Q8N0Z9 540 aa9.6□□□□□ -0.87
CACNA2D3-210ENST00000490478 WASHC2CQ9Y4E1 1318 aa9.58□□□□□ -0.88
CACNA2D3-210ENST00000490478 RANGAP1P46060 587 aaPredicted RBP9.56□□□□□ -0.88
CACNA2D3-210ENST00000490478 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
CACNA2D3-210ENST00000490478 TAOK2Q9UL54 1235 aa9.54□□□□□ -0.88
CACNA2D3-210ENST00000490478 IPO9Q96P70 1041 aaKnown RBP9.53□□□□□ -0.88
CACNA2D3-210ENST00000490478 GLIPR1L2Q4G1C9 344 aa9.53□□□□□ -0.88
CACNA2D3-210ENST00000490478 CEP162Q5TB80 1403 aa9.53□□□□□ -0.88
CACNA2D3-210ENST00000490478 A0A0U1RQG5 324 aaPredicted RBP9.5□□□□□ -0.89
CACNA2D3-210ENST00000490478 RB1CC1Q8TDY2 1594 aa9.5□□□□□ -0.89
CACNA2D3-210ENST00000490478 ZBTB47Q9UFB7 747 aaPredicted RBP9.5□□□□□ -0.89
CACNA2D3-210ENST00000490478 NACADO15069 1562 aa9.5□□□□□ -0.89
CACNA2D3-210ENST00000490478 DHX57Q6P158 1386 aaKnown RBP9.5□□□□□ -0.89
CACNA2D3-210ENST00000490478 HOMEZQ8IX15 550 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms