RNA–Protein interactions for RNA: ENST00000474231.5

DMD-222, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 5,209 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-222ENST00000474231 NISCHQ9Y2I1 1504 aa11.93□□□□□ -0.5
DMD-222ENST00000474231 SUPT5HO00267 1087 aaKnown RBP10.62□□□□□ -0.71
DMD-222ENST00000474231 DCAF8L2P0C7V8 631 aa10.59□□□□□ -0.71
DMD-222ENST00000474231 SHROOM4Q9ULL8 1493 aa10.58□□□□□ -0.72
DMD-222ENST00000474231 HRCP23327 699 aa10.47□□□□□ -0.73
DMD-222ENST00000474231 PCGF6Q9BYE7 350 aa10.37□□□□□ -0.75
DMD-222ENST00000474231 PELP1Q8IZL8 1130 aaKnown RBP10.32□□□□□ -0.76
DMD-222ENST00000474231 CHIC1Q5VXU3 224 aa10.26□□□□□ -0.77
DMD-222ENST00000474231 ZEB1P37275 1124 aaPredicted RBP10.24□□□□□ -0.77
DMD-222ENST00000474231 TRIM26Q12899 539 aaPredicted RBP10.14□□□□□ -0.79
DMD-222ENST00000474231 ZCCHC6Q5VYS8 1495 aaKnown RBP10.1□□□□□ -0.79
DMD-222ENST00000474231 DCAF1Q9Y4B6 1507 aa10.09□□□□□ -0.79
DMD-222ENST00000474231 PPARGC1BQ86YN6 1023 aaKnown RBP10.09□□□□□ -0.79
DMD-222ENST00000474231 MYT1Q01538 1121 aa10.03□□□□□ -0.8
DMD-222ENST00000474231 MYO15BQ96JP2 1530 aa10.01□□□□□ -0.81
DMD-222ENST00000474231 LOC105371045A0A1W2PR82 267 aa9.97□□□□□ -0.81
DMD-222ENST00000474231 CCDC180Q9P1Z9 1646 aa9.96□□□□□ -0.81
DMD-222ENST00000474231 TRIM41Q8WV44 630 aa9.92□□□□□ -0.82
DMD-222ENST00000474231 CENPBP07199 599 aaPredicted RBP9.92□□□□□ -0.82
DMD-222ENST00000474231 FAM9AQ8IZU1 332 aaPredicted RBP9.83□□□□□ -0.84
DMD-222ENST00000474231 CCER1Q8TC90 406 aaPredicted RBP9.81□□□□□ -0.84
DMD-222ENST00000474231 EHMT2Q96KQ7 1210 aa9.76□□□□□ -0.85
DMD-222ENST00000474231 SCAF1Q9H7N4 1312 aaKnown RBP9.71□□□□□ -0.85
DMD-222ENST00000474231 ACIN1Q9UKV3 1341 aaKnown RBP9.7□□□□□ -0.86
DMD-222ENST00000474231 DIEXFQ68CQ4 756 aaKnown RBP9.67□□□□□ -0.86
DMD-222ENST00000474231 GTF3C3Q9Y5Q9 886 aa9.62□□□□□ -0.87
DMD-222ENST00000474231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.61□□□□□ -0.87
DMD-222ENST00000474231 APLP2Q06481 763 aa9.56□□□□□ -0.88
DMD-222ENST00000474231 ABCC9O60706 1549 aa9.56□□□□□ -0.88
DMD-222ENST00000474231 RSF1Q96T23 1441 aaPredicted RBP9.56□□□□□ -0.88
DMD-222ENST00000474231 NEUROD1Q13562 356 aa9.55□□□□□ -0.88
DMD-222ENST00000474231 TTBK1Q5TCY1 1321 aaPredicted RBP9.54□□□□□ -0.88
DMD-222ENST00000474231 YTHDC1Q96MU7 727 aaKnown RBP9.53□□□□□ -0.88
DMD-222ENST00000474231 ZNF316A6NFI3 1004 aaPredicted RBP9.52□□□□□ -0.89
DMD-222ENST00000474231 RB1CC1Q8TDY2 1594 aa9.51□□□□□ -0.89
DMD-222ENST00000474231 UBTFP17480 764 aaKnown RBP9.5□□□□□ -0.89
DMD-222ENST00000474231 SCRIBQ14160 1630 aa9.48□□□□□ -0.89
DMD-222ENST00000474231 CLSPNQ9HAW4 1339 aa9.45□□□□□ -0.9
DMD-222ENST00000474231 HNRNPUL2Q1KMD3 747 aaKnown RBP9.36□□□□□ -0.91
DMD-222ENST00000474231 EEA1Q15075 1411 aa9.34□□□□□ -0.91
DMD-222ENST00000474231 CSRNP3Q8WYN3 585 aa9.34□□□□□ -0.91
DMD-222ENST00000474231 CEP162Q5TB80 1403 aa9.33□□□□□ -0.92
DMD-222ENST00000474231 TNIKQ9UKE5 1360 aa9.32□□□□□ -0.92
DMD-222ENST00000474231 WRNQ14191 1432 aaPredicted RBP eCLIP9.31□□□□□ -0.92
DMD-222ENST00000474231 NEFLP07196 543 aa9.3□□□□□ -0.92
DMD-222ENST00000474231 MIER1Q8N108 512 aa9.28□□□□□ -0.92
DMD-222ENST00000474231 NACADO15069 1562 aa9.28□□□□□ -0.92
DMD-222ENST00000474231 GOLGA3Q08378 1498 aa9.25□□□□□ -0.93
DMD-222ENST00000474231 MROH2BQ7Z745 1585 aa9.23□□□□□ -0.93
DMD-222ENST00000474231 CECR2Q9BXF3 1484 aa9.23□□□□□ -0.93
DMD-222ENST00000474231 RANGAP1P46060 587 aaPredicted RBP9.22□□□□□ -0.93
DMD-222ENST00000474231 BAZ1AQ9NRL2 1556 aaPredicted RBP9.22□□□□□ -0.93
DMD-222ENST00000474231 ERICH6Q7L0X2 663 aa9.22□□□□□ -0.93
DMD-222ENST00000474231 CLIP1P30622 1438 aa9.17□□□□□ -0.94
DMD-222ENST00000474231 CEP164Q9UPV0 1460 aa9.17□□□□□ -0.94
DMD-222ENST00000474231 WIZO95785 1651 aa9.16□□□□□ -0.94
DMD-222ENST00000474231 CCDC88BA6NC98 1476 aa9.14□□□□□ -0.95
DMD-222ENST00000474231 ANP32EQ9BTT0 268 aa9.14□□□□□ -0.95
DMD-222ENST00000474231 SOGA1O94964 1423 aa9.14□□□□□ -0.95
DMD-222ENST00000474231 TOP2AP11388 1531 aaKnown RBP9.14□□□□□ -0.95
DMD-222ENST00000474231 SUPT16HQ9Y5B9 1047 aaKnown RBP9.13□□□□□ -0.95
DMD-222ENST00000474231 ABCC8Q09428 1581 aa9.11□□□□□ -0.95
DMD-222ENST00000474231 ATP1B4Q9UN42 357 aaPredicted RBP9.11□□□□□ -0.95
DMD-222ENST00000474231 VPS8Q8N3P4 1428 aa9.1□□□□□ -0.95
DMD-222ENST00000474231 ITGAEP38570 1179 aa9.07□□□□□ -0.96
DMD-222ENST00000474231 BCANQ96GW7 911 aa9.07□□□□□ -0.96
DMD-222ENST00000474231 ANP32CO43423 234 aa9.06□□□□□ -0.96
DMD-222ENST00000474231 FKBP8Q14318 412 aa9.05□□□□□ -0.96
DMD-222ENST00000474231 PABPN1Q86U42 306 aaKnown RBP eCLIP9.05□□□□□ -0.96
DMD-222ENST00000474231 BAZ1BQ9UIG0 1483 aaKnown RBP9.04□□□□□ -0.96
DMD-222ENST00000474231 MYT1LQ9UL68 1186 aa9.02□□□□□ -0.97
DMD-222ENST00000474231 CDK11AQ9UQ88 783 aaPredicted RBP9.02□□□□□ -0.97
DMD-222ENST00000474231 TSHZ2Q9NRE2 1034 aa9.02□□□□□ -0.97
DMD-222ENST00000474231 SMARCA2P51531 1590 aa9.01□□□□□ -0.97
DMD-222ENST00000474231 SMARCA4P51532 1647 aa9□□□□□ -0.97
DMD-222ENST00000474231 DHX57Q6P158 1386 aaKnown RBP8.98□□□□□ -0.97
DMD-222ENST00000474231 KIF21BO75037 1637 aa8.98□□□□□ -0.97
DMD-222ENST00000474231 RUSC2Q8N2Y8 1516 aa8.97□□□□□ -0.97
DMD-222ENST00000474231 EIF4G1Q04637 1599 aaKnown RBP8.97□□□□□ -0.97
DMD-222ENST00000474231 DDX10Q13206 875 aaKnown RBP8.96□□□□□ -0.97
DMD-222ENST00000474231 FAM50AQ14320 339 aaKnown RBP8.96□□□□□ -0.97
DMD-222ENST00000474231 BCL11AQ9H165 835 aa8.96□□□□□ -0.98
DMD-222ENST00000474231 TIMELESSQ9UNS1 1208 aa8.95□□□□□ -0.98
DMD-222ENST00000474231 CCNB3Q8WWL7 1395 aa8.95□□□□□ -0.98
DMD-222ENST00000474231 CCER2I3L3R5 266 aa8.93□□□□□ -0.98
DMD-222ENST00000474231 RAPGEF2Q9Y4G8 1499 aa8.91□□□□□ -0.98
DMD-222ENST00000474231 RBM19Q9Y4C8 960 aaKnown RBP8.9□□□□□ -0.98
DMD-222ENST00000474231 TONSLQ96HA7 1378 aa8.9□□□□□ -0.99
DMD-222ENST00000474231 KIF27Q86VH2 1401 aa8.89□□□□□ -0.99
DMD-222ENST00000474231 TRIM52Q96A61 297 aa8.88□□□□□ -0.99
DMD-222ENST00000474231 RTL5Q5HYW3 569 aaPredicted RBP8.88□□□□□ -0.99
DMD-222ENST00000474231 SETD5Q9C0A6 1442 aa8.87□□□□□ -0.99
DMD-222ENST00000474231 KANK4Q5T7N3 995 aaPredicted RBP8.87□□□□□ -0.99
DMD-222ENST00000474231 HNRNPUQ00839 825 aaKnown RBP eCLIP8.86□□□□□ -0.99
DMD-222ENST00000474231 RRBP1Q9P2E9 1410 aaKnown RBP8.86□□□□□ -0.99
DMD-222ENST00000474231 RAB3GAP2Q9H2M9 1393 aa8.85□□□□□ -0.99
DMD-222ENST00000474231 ERICH6BQ5W0A0 696 aa8.85□□□□□ -0.99
DMD-222ENST00000474231 ERICH3Q5RHP9 1530 aa8.84□□□□□ -0.99
DMD-222ENST00000474231 SYNJ1O43426 1573 aa8.82□□□□□ -1
DMD-222ENST00000474231 FHAD1B1AJZ9 1412 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms