RNA–Protein interactions for RNA: ENST00000560249.5

MEPE-209, Transcript of matrix extracellular phosphoglycoprotein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MEPE, Length 2,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEPE-209ENST00000560249 AEBP2Q6ZN18 517 aaPredicted RBP14.94□□□□□ -0.02
MEPE-209ENST00000560249 CHIC1Q5VXU3 224 aa14.45□□□□□ -0.1
MEPE-209ENST00000560249 NISCHQ9Y2I1 1504 aa13.25□□□□□ -0.29
MEPE-209ENST00000560249 SENP3Q9H4L4 574 aaPredicted RBP12.92□□□□□ -0.34
MEPE-209ENST00000560249 PHF23Q9BUL5 403 aaPredicted RBP12.66□□□□□ -0.38
MEPE-209ENST00000560249 FOXD1Q16676 465 aa11.89□□□□□ -0.51
MEPE-209ENST00000560249 PLPPR3Q6T4P5 718 aa11.64□□□□□ -0.55
MEPE-209ENST00000560249 SHROOM4Q9ULL8 1493 aa11.3□□□□□ -0.6
MEPE-209ENST00000560249 CCDC180Q9P1Z9 1646 aa11.26□□□□□ -0.61
MEPE-209ENST00000560249 MSH5O43196 834 aa11.25□□□□□ -0.61
MEPE-209ENST00000560249 ZCCHC6Q5VYS8 1495 aaKnown RBP11.18□□□□□ -0.62
MEPE-209ENST00000560249 PIAS4Q8N2W9 510 aaPredicted RBP11.15□□□□□ -0.62
MEPE-209ENST00000560249 PPP6R1Q9UPN7 881 aa11.12□□□□□ -0.63
MEPE-209ENST00000560249 ADRA2BP18089 450 aa11.12□□□□□ -0.63
MEPE-209ENST00000560249 SUPT5HO00267 1087 aaKnown RBP11.07□□□□□ -0.64
MEPE-209ENST00000560249 DCAF8L2P0C7V8 631 aa11.05□□□□□ -0.64
MEPE-209ENST00000560249 DCAF1Q9Y4B6 1507 aa10.84□□□□□ -0.67
MEPE-209ENST00000560249 MYO15BQ96JP2 1530 aa10.68□□□□□ -0.7
MEPE-209ENST00000560249 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
MEPE-209ENST00000560249 POTEDQ86YR6 584 aa10.62□□□□□ -0.71
MEPE-209ENST00000560249 SCRIBQ14160 1630 aa10.58□□□□□ -0.72
MEPE-209ENST00000560249 ABCC9O60706 1549 aa10.53□□□□□ -0.72
MEPE-209ENST00000560249 RSF1Q96T23 1441 aaPredicted RBP10.48□□□□□ -0.73
MEPE-209ENST00000560249 LOC105371045A0A1W2PR82 267 aa10.45□□□□□ -0.74
MEPE-209ENST00000560249 EHMT2Q96KQ7 1210 aa10.45□□□□□ -0.74
MEPE-209ENST00000560249 NACADO15069 1562 aa10.42□□□□□ -0.74
MEPE-209ENST00000560249 SCAF1Q9H7N4 1312 aaKnown RBP10.42□□□□□ -0.74
MEPE-209ENST00000560249 CECR2Q9BXF3 1484 aa10.37□□□□□ -0.75
MEPE-209ENST00000560249 PCGF6Q9BYE7 350 aa10.37□□□□□ -0.75
MEPE-209ENST00000560249 RB1CC1Q8TDY2 1594 aa10.36□□□□□ -0.75
MEPE-209ENST00000560249 MROH2BQ7Z745 1585 aa10.32□□□□□ -0.76
MEPE-209ENST00000560249 HRCP23327 699 aa10.31□□□□□ -0.76
MEPE-209ENST00000560249 TRIM41Q8WV44 630 aa10.3□□□□□ -0.76
MEPE-209ENST00000560249 WIZO95785 1651 aa10.27□□□□□ -0.77
MEPE-209ENST00000560249 DMRT2Q9Y5R5 561 aa10.25□□□□□ -0.77
MEPE-209ENST00000560249 FAM9AQ8IZU1 332 aaPredicted RBP10.24□□□□□ -0.77
MEPE-209ENST00000560249 UNC13AQ9UPW8 1703 aa10.16□□□□□ -0.78
MEPE-209ENST00000560249 PPP4R3CPQ6ZMV5 832 aa10.16□□□□□ -0.78
MEPE-209ENST00000560249 BAZ1AQ9NRL2 1556 aaPredicted RBP10.16□□□□□ -0.78
MEPE-209ENST00000560249 TRIM26Q12899 539 aaPredicted RBP10.15□□□□□ -0.78
MEPE-209ENST00000560249 PPARGC1BQ86YN6 1023 aaKnown RBP10.15□□□□□ -0.78
MEPE-209ENST00000560249 MAPK8IP2Q13387 824 aaPredicted RBP10.14□□□□□ -0.79
MEPE-209ENST00000560249 SMARCA4P51532 1647 aa10.1□□□□□ -0.79
MEPE-209ENST00000560249 EIF4G1Q04637 1599 aaKnown RBP10.08□□□□□ -0.8
MEPE-209ENST00000560249 PABPN1Q86U42 306 aaKnown RBP eCLIP10.07□□□□□ -0.8
MEPE-209ENST00000560249 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
MEPE-209ENST00000560249 CCDC88BA6NC98 1476 aa10.06□□□□□ -0.8
MEPE-209ENST00000560249 SMARCA2P51531 1590 aa10.03□□□□□ -0.8
MEPE-209ENST00000560249 BICRAQ9NZM4 1560 aa10.02□□□□□ -0.8
MEPE-209ENST00000560249 ABCC8Q09428 1581 aa10.02□□□□□ -0.81
MEPE-209ENST00000560249 CNKSR2Q8WXI2 1034 aa10.02□□□□□ -0.81
MEPE-209ENST00000560249 NCBP3Q53F19 620 aaKnown RBP9.94□□□□□ -0.82
MEPE-209ENST00000560249 HOXD11P31277 338 aaPredicted RBP9.93□□□□□ -0.82
MEPE-209ENST00000560249 SOGA1O94964 1423 aa9.93□□□□□ -0.82
MEPE-209ENST00000560249 RTN4Q9NQC3 1192 aaKnown RBP9.9□□□□□ -0.82
MEPE-209ENST00000560249 RNF216Q9NWF9 866 aaPredicted RBP9.9□□□□□ -0.83
MEPE-209ENST00000560249 RUSC2Q8N2Y8 1516 aa9.89□□□□□ -0.83
MEPE-209ENST00000560249 PEG3Q9GZU2 1588 aa9.89□□□□□ -0.83
MEPE-209ENST00000560249 ZEB1P37275 1124 aaPredicted RBP9.87□□□□□ -0.83
MEPE-209ENST00000560249 CSRNP3Q8WYN3 585 aa9.86□□□□□ -0.83
MEPE-209ENST00000560249 ATAD2BQ9ULI0 1458 aa9.85□□□□□ -0.83
MEPE-209ENST00000560249 WRNQ14191 1432 aaPredicted RBP eCLIP9.83□□□□□ -0.84
MEPE-209ENST00000560249 CEP162Q5TB80 1403 aa9.83□□□□□ -0.84
MEPE-209ENST00000560249 UBTFP17480 764 aaKnown RBP9.82□□□□□ -0.84
MEPE-209ENST00000560249 TNIKQ9UKE5 1360 aa9.82□□□□□ -0.84
MEPE-209ENST00000560249 TTBK1Q5TCY1 1321 aaPredicted RBP9.82□□□□□ -0.84
MEPE-209ENST00000560249 BAZ1BQ9UIG0 1483 aaKnown RBP9.81□□□□□ -0.84
MEPE-209ENST00000560249 EEA1Q15075 1411 aa9.8□□□□□ -0.84
MEPE-209ENST00000560249 SYNJ1O43426 1573 aa9.8□□□□□ -0.84
MEPE-209ENST00000560249 KCNA4P22459 653 aa9.79□□□□□ -0.84
MEPE-209ENST00000560249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.79□□□□□ -0.84
MEPE-209ENST00000560249 GOLGA3Q08378 1498 aa9.75□□□□□ -0.85
MEPE-209ENST00000560249 DNAJC5BQ9UF47 199 aa9.74□□□□□ -0.85
MEPE-209ENST00000560249 CCER1Q8TC90 406 aaPredicted RBP9.73□□□□□ -0.85
MEPE-209ENST00000560249 CEP164Q9UPV0 1460 aa9.7□□□□□ -0.86
MEPE-209ENST00000560249 KIF21BO75037 1637 aa9.69□□□□□ -0.86
MEPE-209ENST00000560249 DCAF8L1A6NGE4 600 aa9.67□□□□□ -0.86
MEPE-209ENST00000560249 RAPGEF2Q9Y4G8 1499 aa9.67□□□□□ -0.86
MEPE-209ENST00000560249 RANGAP1P46060 587 aaPredicted RBP9.67□□□□□ -0.86
MEPE-209ENST00000560249 TOP2BQ02880 1626 aa9.67□□□□□ -0.86
MEPE-209ENST00000560249 NCAPD3P42695 1498 aa9.66□□□□□ -0.86
MEPE-209ENST00000560249 CLIP1P30622 1438 aa9.65□□□□□ -0.86
MEPE-209ENST00000560249 HMGXB3Q12766 1538 aa9.63□□□□□ -0.87
MEPE-209ENST00000560249 BIVM-ERCC5R4GMW8 1640 aa9.63□□□□□ -0.87
MEPE-209ENST00000560249 NPM3O75607 178 aaKnown RBP9.62□□□□□ -0.87
MEPE-209ENST00000560249 CUX1P39880 1505 aa9.6□□□□□ -0.87
MEPE-209ENST00000560249 VPS8Q8N3P4 1428 aa9.6□□□□□ -0.87
MEPE-209ENST00000560249 HNRNPUL2Q1KMD3 747 aaKnown RBP9.59□□□□□ -0.87
MEPE-209ENST00000560249 CFTRP13569 1480 aa9.57□□□□□ -0.88
MEPE-209ENST00000560249 PRXQ9BXM0 1461 aa9.56□□□□□ -0.88
MEPE-209ENST00000560249 APLP2Q06481 763 aa9.56□□□□□ -0.88
MEPE-209ENST00000560249 AMER1Q5JTC6 1135 aaPredicted RBP9.55□□□□□ -0.88
MEPE-209ENST00000560249 ERICH3Q5RHP9 1530 aa9.53□□□□□ -0.88
MEPE-209ENST00000560249 KIF27Q86VH2 1401 aa9.53□□□□□ -0.88
MEPE-209ENST00000560249 RNF39Q9H2S5 420 aa9.52□□□□□ -0.88
MEPE-209ENST00000560249 DIEXFQ68CQ4 756 aaKnown RBP9.52□□□□□ -0.89
MEPE-209ENST00000560249 ARAP1Q96P48 1450 aa9.51□□□□□ -0.89
MEPE-209ENST00000560249 KANK4Q5T7N3 995 aaPredicted RBP9.5□□□□□ -0.89
MEPE-209ENST00000560249 PRDM2Q13029 1718 aa9.49□□□□□ -0.89
MEPE-209ENST00000560249 CADPSQ9ULU8 1353 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms