Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PART1_1.1-201ENST00000611761 217 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AL121809.2-201ENST00000613169 341 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 R3HDM2P1-201ENST00000505381 1960 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 PDZK1P1-202ENST00000425209 1350 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AC091132.4-201ENST00000587960 2262 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 PPIAP22-201ENST00000358455 498 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 RNU1-5P-201ENST00000362684 144 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 Y_RNA.472-201ENST00000384322 102 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 RNU6-1119P-201ENST00000384349 108 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 NPM1P11-201ENST00000417106 855 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 TNPO1P1-201ENST00000423641 1138 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AHCYP8-201ENST00000425108 209 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 RPL7AP71-201ENST00000451120 739 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AC117395.2-201ENST00000463122 1128 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AC079203.1-201ENST00000487972 404 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AC093890.1-201ENST00000502554 540 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 CBX3P3-201ENST00000508108 532 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 PRELID3BP4-201ENST00000515476 571 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AC093878.1-201ENST00000515630 432 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 ACER3-213ENST00000533873 929 ntTSL 2 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 RBM4-213ENST00000578778 582 ntTSL 4 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AC087468.1-201ENST00000604365 630 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AL121655.1-201ENST00000605811 308 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AL451074.6-201ENST00000608512 729 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 MRPL57P3-201ENST00000619218 176 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 LINC01808-202ENST00000641680 1116 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RC3H1Q5TC82 RNF19BPY-201ENST00000458209 1550 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 OR4C1P-202ENST00000641065 1569 ntBASIC9.12□□□□□ -0.95
RC3H1Q5TC82 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AL603750.1-201ENST00000624216 1717 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC011477.1-204ENST00000623416 1325 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 TRIM60P19-201ENST00000452879 1462 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC010894.1-201ENST00000313760 361 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 RN7SKP130-201ENST00000364924 301 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 VN1R12P-201ENST00000403778 876 ntBASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC9.11□□□□□ -0.95
RC3H1Q5TC82 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms