RNA–Protein interactions for RNA: ENST00000505381.2

R3HDM2P1-201, Transcript of R3H domain containing 2 pseudogene 1, humanhuman

BASIC

Gene R3HDM2P1, Length 1,960 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2P1-201ENST00000505381 NISCHQ9Y2I1 1504 aa16.14■□□□□ 0.17
R3HDM2P1-201ENST00000505381 AEBP2Q6ZN18 517 aaPredicted RBP15.29■□□□□ 0.04
R3HDM2P1-201ENST00000505381 HRCP23327 699 aa14.82□□□□□ -0.04
R3HDM2P1-201ENST00000505381 PELP1Q8IZL8 1130 aaKnown RBP14.56□□□□□ -0.08
R3HDM2P1-201ENST00000505381 CHIC1Q5VXU3 224 aa14.53□□□□□ -0.08
R3HDM2P1-201ENST00000505381 PPARGC1BQ86YN6 1023 aaKnown RBP14.34□□□□□ -0.11
R3HDM2P1-201ENST00000505381 MYO15BQ96JP2 1530 aa14.29□□□□□ -0.12
R3HDM2P1-201ENST00000505381 PCGF6Q9BYE7 350 aa14.27□□□□□ -0.12
R3HDM2P1-201ENST00000505381 DCAF1Q9Y4B6 1507 aa14.15□□□□□ -0.14
R3HDM2P1-201ENST00000505381 SUPT5HO00267 1087 aaKnown RBP14.11□□□□□ -0.15
R3HDM2P1-201ENST00000505381 SHROOM4Q9ULL8 1493 aa14.08□□□□□ -0.15
R3HDM2P1-201ENST00000505381 MYT1Q01538 1121 aa14.06□□□□□ -0.16
R3HDM2P1-201ENST00000505381 SCAF1Q9H7N4 1312 aaKnown RBP14.05□□□□□ -0.16
R3HDM2P1-201ENST00000505381 CCDC180Q9P1Z9 1646 aa13.99□□□□□ -0.17
R3HDM2P1-201ENST00000505381 TRIM26Q12899 539 aaPredicted RBP13.91□□□□□ -0.18
R3HDM2P1-201ENST00000505381 ZEB1P37275 1124 aaPredicted RBP13.89□□□□□ -0.19
R3HDM2P1-201ENST00000505381 ZCCHC6Q5VYS8 1495 aaKnown RBP13.79□□□□□ -0.2
R3HDM2P1-201ENST00000505381 LOC105371045A0A1W2PR82 267 aa13.72□□□□□ -0.21
R3HDM2P1-201ENST00000505381 ACIN1Q9UKV3 1341 aaKnown RBP13.68□□□□□ -0.22
R3HDM2P1-201ENST00000505381 NEUROD1Q13562 356 aa13.59□□□□□ -0.23
R3HDM2P1-201ENST00000505381 GTF3C3Q9Y5Q9 886 aa13.5□□□□□ -0.25
R3HDM2P1-201ENST00000505381 CENPBP07199 599 aaPredicted RBP13.41□□□□□ -0.26
R3HDM2P1-201ENST00000505381 DIEXFQ68CQ4 756 aaKnown RBP13.31□□□□□ -0.28
R3HDM2P1-201ENST00000505381 TTBK1Q5TCY1 1321 aaPredicted RBP13.29□□□□□ -0.28
R3HDM2P1-201ENST00000505381 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
R3HDM2P1-201ENST00000505381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.17□□□□□ -0.3
R3HDM2P1-201ENST00000505381 CCER1Q8TC90 406 aaPredicted RBP13.15□□□□□ -0.3
R3HDM2P1-201ENST00000505381 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
R3HDM2P1-201ENST00000505381 ABCC9O60706 1549 aa13.12□□□□□ -0.31
R3HDM2P1-201ENST00000505381 ZNF316A6NFI3 1004 aaPredicted RBP13.06□□□□□ -0.32
R3HDM2P1-201ENST00000505381 RSF1Q96T23 1441 aaPredicted RBP13.03□□□□□ -0.32
R3HDM2P1-201ENST00000505381 BCL11AQ9H165 835 aa13.01□□□□□ -0.33
R3HDM2P1-201ENST00000505381 DCAF8L2P0C7V8 631 aa12.99□□□□□ -0.33
R3HDM2P1-201ENST00000505381 FAM9AQ8IZU1 332 aaPredicted RBP12.99□□□□□ -0.33
R3HDM2P1-201ENST00000505381 ANP32EQ9BTT0 268 aa12.98□□□□□ -0.33
R3HDM2P1-201ENST00000505381 RB1CC1Q8TDY2 1594 aa12.98□□□□□ -0.33
R3HDM2P1-201ENST00000505381 CLSPNQ9HAW4 1339 aa12.97□□□□□ -0.33
R3HDM2P1-201ENST00000505381 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.33
R3HDM2P1-201ENST00000505381 MIER1Q8N108 512 aa12.96□□□□□ -0.34
R3HDM2P1-201ENST00000505381 YTHDC1Q96MU7 727 aaKnown RBP12.92□□□□□ -0.34
R3HDM2P1-201ENST00000505381 PHF23Q9BUL5 403 aaPredicted RBP12.92□□□□□ -0.34
R3HDM2P1-201ENST00000505381 TSHZ2Q9NRE2 1034 aa12.88□□□□□ -0.35
R3HDM2P1-201ENST00000505381 SUPT16HQ9Y5B9 1047 aaKnown RBP12.87□□□□□ -0.35
R3HDM2P1-201ENST00000505381 CSRNP3Q8WYN3 585 aa12.8□□□□□ -0.36
R3HDM2P1-201ENST00000505381 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
R3HDM2P1-201ENST00000505381 EIF4G1Q04637 1599 aaKnown RBP12.74□□□□□ -0.37
R3HDM2P1-201ENST00000505381 CEP162Q5TB80 1403 aa12.71□□□□□ -0.38
R3HDM2P1-201ENST00000505381 TNIKQ9UKE5 1360 aa12.68□□□□□ -0.38
R3HDM2P1-201ENST00000505381 SCRIBQ14160 1630 aa12.62□□□□□ -0.39
R3HDM2P1-201ENST00000505381 PRKCSHP14314 528 aaPredicted RBP12.6□□□□□ -0.39
R3HDM2P1-201ENST00000505381 MROH2BQ7Z745 1585 aa12.58□□□□□ -0.4
R3HDM2P1-201ENST00000505381 CECR2Q9BXF3 1484 aa12.54□□□□□ -0.4
R3HDM2P1-201ENST00000505381 RBM19Q9Y4C8 960 aaKnown RBP12.54□□□□□ -0.4
R3HDM2P1-201ENST00000505381 WIZO95785 1651 aa12.54□□□□□ -0.4
R3HDM2P1-201ENST00000505381 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
R3HDM2P1-201ENST00000505381 EEA1Q15075 1411 aa12.53□□□□□ -0.4
R3HDM2P1-201ENST00000505381 BAZ1AQ9NRL2 1556 aaPredicted RBP12.52□□□□□ -0.4
R3HDM2P1-201ENST00000505381 ABCC8Q09428 1581 aa12.51□□□□□ -0.41
R3HDM2P1-201ENST00000505381 HNRNPUL2Q1KMD3 747 aaKnown RBP12.49□□□□□ -0.41
R3HDM2P1-201ENST00000505381 SOGA1O94964 1423 aa12.48□□□□□ -0.41
R3HDM2P1-201ENST00000505381 MSH5O43196 834 aa12.47□□□□□ -0.41
R3HDM2P1-201ENST00000505381 DHX57Q6P158 1386 aaKnown RBP12.46□□□□□ -0.42
R3HDM2P1-201ENST00000505381 GOLGA3Q08378 1498 aa12.46□□□□□ -0.42
R3HDM2P1-201ENST00000505381 NACADO15069 1562 aa12.42□□□□□ -0.42
R3HDM2P1-201ENST00000505381 FKBP8Q14318 412 aa12.41□□□□□ -0.42
R3HDM2P1-201ENST00000505381 FANCIQ9NVI1 1328 aa12.41□□□□□ -0.42
R3HDM2P1-201ENST00000505381 RUSC2Q8N2Y8 1516 aa12.4□□□□□ -0.42
R3HDM2P1-201ENST00000505381 KCNH8Q96L42 1107 aa12.39□□□□□ -0.43
R3HDM2P1-201ENST00000505381 VPS8Q8N3P4 1428 aa12.38□□□□□ -0.43
R3HDM2P1-201ENST00000505381 BCANQ96GW7 911 aa12.38□□□□□ -0.43
R3HDM2P1-201ENST00000505381 CLIP1P30622 1438 aa12.38□□□□□ -0.43
R3HDM2P1-201ENST00000505381 ERICH6Q7L0X2 663 aa12.37□□□□□ -0.43
R3HDM2P1-201ENST00000505381 MYT1LQ9UL68 1186 aa12.37□□□□□ -0.43
R3HDM2P1-201ENST00000505381 UBTFP17480 764 aaKnown RBP12.36□□□□□ -0.43
R3HDM2P1-201ENST00000505381 KIF21BO75037 1637 aa12.36□□□□□ -0.43
R3HDM2P1-201ENST00000505381 TOP2AP11388 1531 aaKnown RBP12.34□□□□□ -0.43
R3HDM2P1-201ENST00000505381 CUX2O14529 1486 aa12.33□□□□□ -0.44
R3HDM2P1-201ENST00000505381 CEP164Q9UPV0 1460 aa12.32□□□□□ -0.44
R3HDM2P1-201ENST00000505381 SMARCA2P51531 1590 aa12.31□□□□□ -0.44
R3HDM2P1-201ENST00000505381 BAZ1BQ9UIG0 1483 aaKnown RBP12.29□□□□□ -0.44
R3HDM2P1-201ENST00000505381 APLP2Q06481 763 aa12.29□□□□□ -0.44
R3HDM2P1-201ENST00000505381 NEFLP07196 543 aa12.27□□□□□ -0.44
R3HDM2P1-201ENST00000505381 CCER2I3L3R5 266 aa12.24□□□□□ -0.45
R3HDM2P1-201ENST00000505381 ITGAEP38570 1179 aa12.24□□□□□ -0.45
R3HDM2P1-201ENST00000505381 RRBP1Q9P2E9 1410 aaKnown RBP12.24□□□□□ -0.45
R3HDM2P1-201ENST00000505381 PPP1R15AO75807 674 aaPredicted RBP12.23□□□□□ -0.45
R3HDM2P1-201ENST00000505381 DEKP35659 375 aaKnown RBP12.23□□□□□ -0.45
R3HDM2P1-201ENST00000505381 FOXD1Q16676 465 aa12.19□□□□□ -0.46
R3HDM2P1-201ENST00000505381 MAPKBP1O60336 1514 aa12.19□□□□□ -0.46
R3HDM2P1-201ENST00000505381 ERICH6BQ5W0A0 696 aa12.18□□□□□ -0.46
R3HDM2P1-201ENST00000505381 ANO8Q9HCE9 1232 aaPredicted RBP12.16□□□□□ -0.46
R3HDM2P1-201ENST00000505381 CDK11AQ9UQ88 783 aaPredicted RBP12.16□□□□□ -0.46
R3HDM2P1-201ENST00000505381 DDX10Q13206 875 aaKnown RBP12.15□□□□□ -0.46
R3HDM2P1-201ENST00000505381 RAPGEF2Q9Y4G8 1499 aa12.15□□□□□ -0.46
R3HDM2P1-201ENST00000505381 SMARCA4P51532 1647 aa12.15□□□□□ -0.47
R3HDM2P1-201ENST00000505381 WDR97A6NE52 1622 aa12.14□□□□□ -0.47
R3HDM2P1-201ENST00000505381 SYNJ1O43426 1573 aa12.12□□□□□ -0.47
R3HDM2P1-201ENST00000505381 TRIM52Q96A61 297 aa12.12□□□□□ -0.47
R3HDM2P1-201ENST00000505381 ARAP1Q96P48 1450 aa12.1□□□□□ -0.47
R3HDM2P1-201ENST00000505381 UNC13AQ9UPW8 1703 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms