Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
APOBP04114 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 SCN5A-204ENST00000414099 8303 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC3.61□□□□□ -1.83
APOBP04114 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.61□□□□□ -1.83
APOBP04114 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.61□□□□□ -1.83
APOBP04114 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.61□□□□□ -1.83
APOBP04114 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
APOBP04114 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 BNIP3P1-201ENST00000547295 580 ntBASIC3.61□□□□□ -1.83
APOBP04114 AC126615.2-201ENST00000553003 515 ntBASIC3.61□□□□□ -1.83
APOBP04114 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 TEK-202ENST00000406359 3935 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 SNURFL-201ENST00000309296 343 ntBASIC3.61□□□□□ -1.83
APOBP04114 RN7SKP28-201ENST00000364770 305 ntBASIC3.61□□□□□ -1.83
APOBP04114 AL139128.1-201ENST00000413921 941 ntBASIC3.61□□□□□ -1.83
APOBP04114 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC3.61□□□□□ -1.83
APOBP04114 RPL7P61-201ENST00000451721 751 ntBASIC3.61□□□□□ -1.83
APOBP04114 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC3.61□□□□□ -1.83
APOBP04114 AL110118.1-201ENST00000553543 400 ntBASIC3.61□□□□□ -1.83
APOBP04114 IGBP1P1-201ENST00000554337 1009 ntBASIC3.61□□□□□ -1.83
APOBP04114 AC024589.2-201ENST00000605642 1294 ntBASIC3.61□□□□□ -1.83
APOBP04114 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.61□□□□□ -1.83
APOBP04114 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 RPL38P3-201ENST00000484463 213 ntBASIC3.61□□□□□ -1.83
APOBP04114 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC3.61□□□□□ -1.83
APOBP04114 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
APOBP04114 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 AC008937.3-201ENST00000606813 1700 ntBASIC3.61□□□□□ -1.83
APOBP04114 GABRB3-204ENST00000541819 5934 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
APOBP04114 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
APOBP04114 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 RPS4XP5-201ENST00000419038 768 ntBASIC3.61□□□□□ -1.83
APOBP04114 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 GYG1P1-201ENST00000460864 698 ntBASIC3.61□□□□□ -1.83
APOBP04114 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.61□□□□□ -1.83
APOBP04114 AC004825.1-201ENST00000555068 586 ntBASIC3.61□□□□□ -1.83
APOBP04114 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.61□□□□□ -1.83
APOBP04114 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC3.61□□□□□ -1.83
APOBP04114 AC104687.2-201ENST00000604442 342 ntBASIC3.61□□□□□ -1.83
APOBP04114 EIF3FP1-201ENST00000613970 806 ntBASIC3.61□□□□□ -1.83
APOBP04114 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBP04114 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 TMEM178B-202ENST00000565468 10558 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 TMEM178B-203ENST00000610315 10552 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
APOBP04114 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOBP04114 AC112255.1-201ENST00000624070 2493 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms