Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 AL365475.1-201ENST00000565135 1949 ntBASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 SPATA31E3P-201ENST00000613133 4214 ntBASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 ATP13A4-201ENST00000295548 2157 ntTSL 5 BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 AC023632.6-201ENST00000624338 2177 ntBASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRTAP4-3Q9BYR4 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 Z95327.2-201ENST00000414579 1873 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 AC073349.2-201ENST00000427545 1603 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 AL121936.1-201ENST00000641660 2884 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 FRG2C-201ENST00000308062 2078 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 EXOC7P1-201ENST00000509881 2059 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 RBBP8P1-201ENST00000449447 1844 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 BIN2P2-201ENST00000503900 1303 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 AL022323.3-201ENST00000623888 5388 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 MTND5P19-201ENST00000424872 1794 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 PPP2R3A-205ENST00000490467 1782 ntTSL 2 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 LY9-203ENST00000368037 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 AL080312.1-201ENST00000256654 824 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 MIR369-201ENST00000362155 70 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 RNY4P14-201ENST00000363656 96 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 RNA5SP161-201ENST00000363871 115 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 RNU6-1322P-201ENST00000364309 107 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 RNA5SP141-201ENST00000364543 120 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 AC234772.1-201ENST00000377927 937 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 SNORA22B-201ENST00000383876 138 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 OLA1P1-201ENST00000396387 1189 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 AL161787.1-201ENST00000401543 174 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 OR4F7P-201ENST00000402444 931 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 AL589994.1-201ENST00000404962 340 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 OR4F1P-201ENST00000405102 938 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 CCNYL3-201ENST00000407030 998 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 RPL31-202ENST00000409000 641 ntTSL 2 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 RN7SKP119-201ENST00000410753 273 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 RNU4-22P-201ENST00000411058 166 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 RMRPP5-201ENST00000411156 267 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 RPL21P24-201ENST00000413752 448 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 AC108032.1-201ENST00000416706 207 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 AL023755.1-203ENST00000422253 519 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 AC092832.1-201ENST00000422934 400 ntBASIC2.75□□□□□ -1.97
KRTAP4-3Q9BYR4 PTP4A1P7-201ENST00000423476 514 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms