RNA–Protein interactions for RNA: ENST00000291478.9

KALRN-202, Transcript of kalirin RhoGEF kinase, humanhuman

TSL 1 (best) BASIC

Gene KALRN, Length 10,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KALRN-202ENST00000291478 DCAF8L2P0C7V8 631 aa14.09□□□□□ -0.15
KALRN-202ENST00000291478 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
KALRN-202ENST00000291478 SUPT5HO00267 1087 aaKnown RBP13.84□□□□□ -0.19
KALRN-202ENST00000291478 SHROOM4Q9ULL8 1493 aa13.59□□□□□ -0.23
KALRN-202ENST00000291478 TTBK1Q5TCY1 1321 aaPredicted RBP13.5□□□□□ -0.25
KALRN-202ENST00000291478 PCGF6Q9BYE7 350 aa13.49□□□□□ -0.25
KALRN-202ENST00000291478 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
KALRN-202ENST00000291478 YTHDC1Q96MU7 727 aaKnown RBP13.27□□□□□ -0.29
KALRN-202ENST00000291478 FAM9AQ8IZU1 332 aaPredicted RBP13.21□□□□□ -0.29
KALRN-202ENST00000291478 ERICH6Q7L0X2 663 aa13.16□□□□□ -0.3
KALRN-202ENST00000291478 MYT1Q01538 1121 aa13.16□□□□□ -0.3
KALRN-202ENST00000291478 CENPBP07199 599 aaPredicted RBP13.03□□□□□ -0.32
KALRN-202ENST00000291478 PPARGC1BQ86YN6 1023 aaKnown RBP13.01□□□□□ -0.33
KALRN-202ENST00000291478 RANGAP1P46060 587 aaPredicted RBP12.98□□□□□ -0.33
KALRN-202ENST00000291478 CCER1Q8TC90 406 aaPredicted RBP12.92□□□□□ -0.34
KALRN-202ENST00000291478 APLP2Q06481 763 aa12.78□□□□□ -0.36
KALRN-202ENST00000291478 HRCP23327 699 aa12.76□□□□□ -0.37
KALRN-202ENST00000291478 NEFLP07196 543 aa12.69□□□□□ -0.38
KALRN-202ENST00000291478 ZEB1P37275 1124 aaPredicted RBP12.68□□□□□ -0.38
KALRN-202ENST00000291478 CNGB1Q14028 1251 aaPredicted RBP12.6□□□□□ -0.39
KALRN-202ENST00000291478 BCANQ96GW7 911 aa12.56□□□□□ -0.4
KALRN-202ENST00000291478 NISCHQ9Y2I1 1504 aa12.55□□□□□ -0.4
KALRN-202ENST00000291478 ATP1B4Q9UN42 357 aaPredicted RBP12.54□□□□□ -0.4
KALRN-202ENST00000291478 LOC105371045A0A1W2PR82 267 aa12.53□□□□□ -0.4
KALRN-202ENST00000291478 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
KALRN-202ENST00000291478 GTF3C3Q9Y5Q9 886 aa12.47□□□□□ -0.41
KALRN-202ENST00000291478 POLR3GLQ9BT43 218 aa12.43□□□□□ -0.42
KALRN-202ENST00000291478 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
KALRN-202ENST00000291478 TRIM26Q12899 539 aaPredicted RBP12.42□□□□□ -0.42
KALRN-202ENST00000291478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
KALRN-202ENST00000291478 ITGAEP38570 1179 aa12.39□□□□□ -0.43
KALRN-202ENST00000291478 HNRNPUL2Q1KMD3 747 aaKnown RBP12.36□□□□□ -0.43
KALRN-202ENST00000291478 DAXXQ9UER7 740 aaPredicted RBP12.32□□□□□ -0.44
KALRN-202ENST00000291478 DIEXFQ68CQ4 756 aaKnown RBP12.32□□□□□ -0.44
KALRN-202ENST00000291478 RTL5Q5HYW3 569 aaPredicted RBP12.25□□□□□ -0.45
KALRN-202ENST00000291478 CHIC1Q5VXU3 224 aa12.14□□□□□ -0.47
KALRN-202ENST00000291478 ZNF316A6NFI3 1004 aaPredicted RBP12.13□□□□□ -0.47
KALRN-202ENST00000291478 ACIN1Q9UKV3 1341 aaKnown RBP12.12□□□□□ -0.47
KALRN-202ENST00000291478 EIF5BO60841 1220 aaKnown RBP12.12□□□□□ -0.47
KALRN-202ENST00000291478 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
KALRN-202ENST00000291478 BCL11AQ9H165 835 aa12.05□□□□□ -0.48
KALRN-202ENST00000291478 CLSPNQ9HAW4 1339 aa12.05□□□□□ -0.48
KALRN-202ENST00000291478 NPM2Q86SE8 214 aaKnown RBP12.03□□□□□ -0.48
KALRN-202ENST00000291478 NEUROD1Q13562 356 aa11.99□□□□□ -0.49
KALRN-202ENST00000291478 NBR1Q14596 966 aa11.97□□□□□ -0.49
KALRN-202ENST00000291478 CDK11AQ9UQ88 783 aaPredicted RBP11.94□□□□□ -0.5
KALRN-202ENST00000291478 SLC4A1APQ9BWU0 796 aaKnown RBP11.92□□□□□ -0.5
KALRN-202ENST00000291478 ARXQ96QS3 562 aa11.91□□□□□ -0.5
KALRN-202ENST00000291478 FKBP8Q14318 412 aa11.87□□□□□ -0.51
KALRN-202ENST00000291478 IRX6P78412 446 aaPredicted RBP11.84□□□□□ -0.51
KALRN-202ENST00000291478 ZNF326Q5BKZ1 582 aaKnown RBP11.82□□□□□ -0.52
KALRN-202ENST00000291478 FAM50AQ14320 339 aaKnown RBP11.82□□□□□ -0.52
KALRN-202ENST00000291478 RTN4Q9NQC3 1192 aaKnown RBP11.8□□□□□ -0.52
KALRN-202ENST00000291478 MYT1LQ9UL68 1186 aa11.78□□□□□ -0.52
KALRN-202ENST00000291478 ANP32CO43423 234 aa11.76□□□□□ -0.53
KALRN-202ENST00000291478 SENP3-EIF4A1A0A087X0R7 540 aa11.74□□□□□ -0.53
KALRN-202ENST00000291478 ANP32AP39687 249 aaKnown RBP11.74□□□□□ -0.53
KALRN-202ENST00000291478 TRIM52Q96A61 297 aa11.71□□□□□ -0.54
KALRN-202ENST00000291478 MIER1Q8N108 512 aa11.66□□□□□ -0.54
KALRN-202ENST00000291478 SALL2Q9Y467 1007 aaPredicted RBP11.65□□□□□ -0.54
KALRN-202ENST00000291478 CANXP27824 592 aaKnown RBP11.63□□□□□ -0.55
KALRN-202ENST00000291478 HIRIP3Q9BW71 556 aaPredicted RBP11.61□□□□□ -0.55
KALRN-202ENST00000291478 DDX10Q13206 875 aaKnown RBP11.6□□□□□ -0.55
KALRN-202ENST00000291478 ANP32EQ9BTT0 268 aa11.59□□□□□ -0.55
KALRN-202ENST00000291478 ARID3CA6NKF2 412 aa11.58□□□□□ -0.56
KALRN-202ENST00000291478 FAM9BQ8IZU0 186 aa11.58□□□□□ -0.56
KALRN-202ENST00000291478 HNRNPUQ00839 825 aaKnown RBP eCLIP11.58□□□□□ -0.56
KALRN-202ENST00000291478 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.54□□□□□ -0.56
KALRN-202ENST00000291478 LAS1LQ9Y4W2 734 aaKnown RBP11.53□□□□□ -0.56
KALRN-202ENST00000291478 ZBTB47Q9UFB7 747 aaPredicted RBP11.51□□□□□ -0.57
KALRN-202ENST00000291478 SLC24A1O60721 1099 aa11.51□□□□□ -0.57
KALRN-202ENST00000291478 AMER1Q5JTC6 1135 aaPredicted RBP11.49□□□□□ -0.57
KALRN-202ENST00000291478 GLIPR1L2Q4G1C9 344 aa11.49□□□□□ -0.57
KALRN-202ENST00000291478 P3H3Q8IVL6 736 aa11.48□□□□□ -0.57
KALRN-202ENST00000291478 ARID4BQ4LE39 1312 aaPredicted RBP11.47□□□□□ -0.57
KALRN-202ENST00000291478 CCDC136Q96JN2 1154 aa11.47□□□□□ -0.57
KALRN-202ENST00000291478 TPRNQ4KMQ1 711 aa11.44□□□□□ -0.58
KALRN-202ENST00000291478 HSP90AA1P07900 732 aaKnown RBP11.43□□□□□ -0.58
KALRN-202ENST00000291478 CSRNP3Q8WYN3 585 aa11.43□□□□□ -0.58
KALRN-202ENST00000291478 MYO15BQ96JP2 1530 aa11.41□□□□□ -0.58
KALRN-202ENST00000291478 NAP1L5Q96NT1 182 aaPredicted RBP11.39□□□□□ -0.59
KALRN-202ENST00000291478 DEKP35659 375 aaKnown RBP11.39□□□□□ -0.59
KALRN-202ENST00000291478 ARID3AQ99856 593 aa11.38□□□□□ -0.59
KALRN-202ENST00000291478 ANP32BQ92688 251 aaKnown RBP11.37□□□□□ -0.59
KALRN-202ENST00000291478 NEFMP07197 916 aa11.35□□□□□ -0.59
KALRN-202ENST00000291478 SUPT16HQ9Y5B9 1047 aaKnown RBP11.35□□□□□ -0.59
KALRN-202ENST00000291478 SENP3Q9H4L4 574 aaPredicted RBP11.35□□□□□ -0.59
KALRN-202ENST00000291478 ZBTB7CA1YPR0 619 aa11.32□□□□□ -0.6
KALRN-202ENST00000291478 MRS2Q9HD23 443 aa11.31□□□□□ -0.6
KALRN-202ENST00000291478 DCAF1Q9Y4B6 1507 aa11.26□□□□□ -0.61
KALRN-202ENST00000291478 B4GALNT3Q6L9W6 998 aa11.26□□□□□ -0.61
KALRN-202ENST00000291478 NCLP19338 710 aaKnown RBP11.25□□□□□ -0.61
KALRN-202ENST00000291478 ZNF777Q9ULD5 760 aaPredicted RBP11.25□□□□□ -0.61
KALRN-202ENST00000291478 NOP58Q9Y2X3 529 aaKnown RBP11.24□□□□□ -0.61
KALRN-202ENST00000291478 TONSLQ96HA7 1378 aa11.24□□□□□ -0.61
KALRN-202ENST00000291478 UPF2Q9HAU5 1272 aaKnown RBP11.23□□□□□ -0.61
KALRN-202ENST00000291478 CHIC2Q9UKJ5 165 aa11.23□□□□□ -0.61
KALRN-202ENST00000291478 PABPN1Q86U42 306 aaKnown RBP eCLIP11.22□□□□□ -0.61
KALRN-202ENST00000291478 SPRYD3Q8NCJ5 442 aa11.22□□□□□ -0.61
KALRN-202ENST00000291478 RBM19Q9Y4C8 960 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms