Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.89□□□□□ -0.99
CCDC85AQ96PX6 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
CCDC85AQ96PX6 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC111188.2-201ENST00000529697 1387 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 SPATA31C2-201ENST00000324915 3777 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC092451.3-201ENST00000625067 1343 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 OR5H15-201ENST00000383696 930 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 RNU6-796P-201ENST00000391086 107 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC019178.2-201ENST00000423595 505 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC013410.1-201ENST00000436223 1232 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 ELOCP8-201ENST00000439309 332 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC092393.1-201ENST00000439625 742 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 ELOCP15-201ENST00000442090 332 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC234781.3-201ENST00000452540 973 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC093899.1-201ENST00000457984 376 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 RPL23P10-201ENST00000468780 412 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 SYPL1P1-201ENST00000473622 768 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 RPS4XP6-201ENST00000477670 797 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 RPL7P41-201ENST00000485823 957 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 RNA5SP287-201ENST00000516358 103 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 RNU6-232P-201ENST00000517144 64 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 TMEM97P2-201ENST00000517841 403 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 ERP27-202ENST00000540097 993 ntTSL 2 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC087897.1-201ENST00000550134 156 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC023813.2-201ENST00000564321 469 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 GARSP1-201ENST00000570895 719 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC087241.4-201ENST00000612441 480 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 RN7SL126P-201ENST00000616400 299 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC025162.2-201ENST00000619602 560 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AL358913.2-201ENST00000553881 1548 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 AC026464.2-201ENST00000567834 2421 ntBASIC8.88□□□□□ -0.99
CCDC85AQ96PX6 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.87□□□□□ -0.99
CCDC85AQ96PX6 AP001157.1-201ENST00000550837 2339 ntBASIC8.87□□□□□ -0.99
CCDC85AQ96PX6 MTND5P11-201ENST00000511037 1812 ntBASIC8.87□□□□□ -0.99
CCDC85AQ96PX6 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CCDC85AQ96PX6 NEK2P2-201ENST00000438441 1338 ntBASIC8.87□□□□□ -0.99
CCDC85AQ96PX6 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
CCDC85AQ96PX6 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CCDC85AQ96PX6 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC8.87□□□□□ -0.99
CCDC85AQ96PX6 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms