RNA–Protein interactions for RNA: ENST00000635966.1

LINC00598-209, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 1,148 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-209ENST00000635966 AEBP2Q6ZN18 517 aaPredicted RBP24.48■■□□□ 1.51
LINC00598-209ENST00000635966 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
LINC00598-209ENST00000635966 SENP3Q9H4L4 574 aaPredicted RBP20.91■□□□□ 0.94
LINC00598-209ENST00000635966 PHF23Q9BUL5 403 aaPredicted RBP20.88■□□□□ 0.93
LINC00598-209ENST00000635966 FOXD1Q16676 465 aa19.36■□□□□ 0.69
LINC00598-209ENST00000635966 PLPPR3Q6T4P5 718 aa19.35■□□□□ 0.69
LINC00598-209ENST00000635966 ADRA2BP18089 450 aa18.51■□□□□ 0.55
LINC00598-209ENST00000635966 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
LINC00598-209ENST00000635966 PIAS4Q8N2W9 510 aaPredicted RBP18.29■□□□□ 0.52
LINC00598-209ENST00000635966 MSH5O43196 834 aa17.99■□□□□ 0.47
LINC00598-209ENST00000635966 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
LINC00598-209ENST00000635966 PPP4R3CPQ6ZMV5 832 aa17■□□□□ 0.31
LINC00598-209ENST00000635966 MAPK8IP2Q13387 824 aaPredicted RBP16.82■□□□□ 0.28
LINC00598-209ENST00000635966 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
LINC00598-209ENST00000635966 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
LINC00598-209ENST00000635966 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
LINC00598-209ENST00000635966 POTEDQ86YR6 584 aa16.57■□□□□ 0.24
LINC00598-209ENST00000635966 KCNA4P22459 653 aa16.41■□□□□ 0.22
LINC00598-209ENST00000635966 RNF216Q9NWF9 866 aaPredicted RBP16.27■□□□□ 0.2
LINC00598-209ENST00000635966 NPM3O75607 178 aaKnown RBP16.24■□□□□ 0.19
LINC00598-209ENST00000635966 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
LINC00598-209ENST00000635966 DCAF8L1A6NGE4 600 aa16.05■□□□□ 0.16
LINC00598-209ENST00000635966 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
LINC00598-209ENST00000635966 SLC4A1APQ9BWU0 796 aaKnown RBP15.67■□□□□ 0.1
LINC00598-209ENST00000635966 NISCHQ9Y2I1 1504 aa15.57■□□□□ 0.08
LINC00598-209ENST00000635966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.56■□□□□ 0.08
LINC00598-209ENST00000635966 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
LINC00598-209ENST00000635966 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
LINC00598-209ENST00000635966 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
LINC00598-209ENST00000635966 FOXD4L1Q9NU39 408 aa15.19■□□□□ 0.02
LINC00598-209ENST00000635966 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
LINC00598-209ENST00000635966 CACNB1Q02641 598 aaPredicted RBP15.14■□□□□ 0.01
LINC00598-209ENST00000635966 EHMT2Q96KQ7 1210 aa15.07■□□□□ 0
LINC00598-209ENST00000635966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
LINC00598-209ENST00000635966 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
LINC00598-209ENST00000635966 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
LINC00598-209ENST00000635966 ZBTB22O15209 634 aa15.04■□□□□ -0
LINC00598-209ENST00000635966 APLP2Q06481 763 aa14.97□□□□□ -0.01
LINC00598-209ENST00000635966 SAMD1Q6SPF0 538 aaPredicted RBP14.97□□□□□ -0.01
LINC00598-209ENST00000635966 CSRNP3Q8WYN3 585 aa14.88□□□□□ -0.03
LINC00598-209ENST00000635966 CAPN15O75808 1086 aa14.86□□□□□ -0.03
LINC00598-209ENST00000635966 SPINK5Q9NQ38 1064 aaPredicted RBP14.82□□□□□ -0.04
LINC00598-209ENST00000635966 TRHP20396 242 aaPredicted RBP14.75□□□□□ -0.05
LINC00598-209ENST00000635966 ZNF219Q9P2Y4 722 aaPredicted RBP14.73□□□□□ -0.05
LINC00598-209ENST00000635966 ATXN8OSP0DMR3 200 aa14.66□□□□□ -0.06
LINC00598-209ENST00000635966 ATF5Q9Y2D1 282 aaPredicted RBP14.59□□□□□ -0.07
LINC00598-209ENST00000635966 DSG3P32926 999 aa14.55□□□□□ -0.08
LINC00598-209ENST00000635966 ABCB7O75027 752 aa14.52□□□□□ -0.09
LINC00598-209ENST00000635966 POLA2Q14181 598 aa14.44□□□□□ -0.1
LINC00598-209ENST00000635966 ABCC9O60706 1549 aa14.25□□□□□ -0.13
LINC00598-209ENST00000635966 ZBTB12Q9Y330 459 aaPredicted RBP14.23□□□□□ -0.13
LINC00598-209ENST00000635966 FBLN2P98095 1184 aa14.13□□□□□ -0.15
LINC00598-209ENST00000635966 CCDC180Q9P1Z9 1646 aa14.05□□□□□ -0.16
LINC00598-209ENST00000635966 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.17
LINC00598-209ENST00000635966 MKRN4PQ13434 485 aaPredicted RBP13.94□□□□□ -0.18
LINC00598-209ENST00000635966 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
LINC00598-209ENST00000635966 SPDYE2BA6NHP3 402 aa13.8□□□□□ -0.2
LINC00598-209ENST00000635966 SPDYE6P0CI01 402 aa13.8□□□□□ -0.2
LINC00598-209ENST00000635966 SPDYE2Q495Y8 402 aa13.8□□□□□ -0.2
LINC00598-209ENST00000635966 ZNF692Q9BU19 519 aaPredicted RBP13.76□□□□□ -0.21
LINC00598-209ENST00000635966 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
LINC00598-209ENST00000635966 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
LINC00598-209ENST00000635966 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
LINC00598-209ENST00000635966 REM2Q8IYK8 340 aaPredicted RBP13.56□□□□□ -0.24
LINC00598-209ENST00000635966 PABPN1Q86U42 306 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC00598-209ENST00000635966 FKBP8Q14318 412 aa13.54□□□□□ -0.24
LINC00598-209ENST00000635966 RB1CC1Q8TDY2 1594 aa13.5□□□□□ -0.25
LINC00598-209ENST00000635966 SPDYE1Q8NFV5 336 aaPredicted RBP13.45□□□□□ -0.26
LINC00598-209ENST00000635966 CLEC11AQ9Y240 323 aa13.44□□□□□ -0.26
LINC00598-209ENST00000635966 PITPNM1O00562 1244 aa13.4□□□□□ -0.26
LINC00598-209ENST00000635966 CHRDL2Q6WN34 429 aa13.39□□□□□ -0.27
LINC00598-209ENST00000635966 NACADO15069 1562 aa13.39□□□□□ -0.27
LINC00598-209ENST00000635966 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
LINC00598-209ENST00000635966 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
LINC00598-209ENST00000635966 PROM2Q8N271 834 aa13.29□□□□□ -0.28
LINC00598-209ENST00000635966 DCAF8L2P0C7V8 631 aa13.19□□□□□ -0.3
LINC00598-209ENST00000635966 MYO15BQ96JP2 1530 aa13.18□□□□□ -0.3
LINC00598-209ENST00000635966 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00598-209ENST00000635966 PIP4P2Q8N4L2 257 aa13.16□□□□□ -0.3
LINC00598-209ENST00000635966 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
LINC00598-209ENST00000635966 UNC13AQ9UPW8 1703 aa13.13□□□□□ -0.31
LINC00598-209ENST00000635966 POTEHQ6S545 545 aa13.13□□□□□ -0.31
LINC00598-209ENST00000635966 BICRAQ9NZM4 1560 aa13.11□□□□□ -0.31
LINC00598-209ENST00000635966 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
LINC00598-209ENST00000635966 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
LINC00598-209ENST00000635966 PLEKHG5O94827 1062 aa13.04□□□□□ -0.32
LINC00598-209ENST00000635966 MIER1Q8N108 512 aa13.02□□□□□ -0.33
LINC00598-209ENST00000635966 PLCD3Q8N3E9 789 aa13□□□□□ -0.33
LINC00598-209ENST00000635966 SHROOM4Q9ULL8 1493 aa12.99□□□□□ -0.33
LINC00598-209ENST00000635966 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
LINC00598-209ENST00000635966 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
LINC00598-209ENST00000635966 CECR2Q9BXF3 1484 aa12.91□□□□□ -0.34
LINC00598-209ENST00000635966 VASPP50552 380 aaPredicted RBP12.9□□□□□ -0.34
LINC00598-209ENST00000635966 DCAF1Q9Y4B6 1507 aa12.89□□□□□ -0.35
LINC00598-209ENST00000635966 CC2D2AQ9P2K1 1620 aa12.88□□□□□ -0.35
LINC00598-209ENST00000635966 HAX1O00165 279 aa12.87□□□□□ -0.35
LINC00598-209ENST00000635966 NPM1P06748 294 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC00598-209ENST00000635966 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
LINC00598-209ENST00000635966 ZCCHC6Q5VYS8 1495 aaKnown RBP12.85□□□□□ -0.35
LINC00598-209ENST00000635966 KLHL34Q8N239 644 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms