RNA–Protein interactions for RNA: ENST00000511346.1

AC012055.1-201, humanhuman

TSL 3 BASIC

Gene AC012055.1, Length 1,144 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012055.1-201ENST00000511346 AEBP2Q6ZN18 517 aaPredicted RBP27.86■■■□□ 2.05
AC012055.1-201ENST00000511346 CHIC1Q5VXU3 224 aa26.46■■□□□ 1.83
AC012055.1-201ENST00000511346 SENP3Q9H4L4 574 aaPredicted RBP23.78■■□□□ 1.4
AC012055.1-201ENST00000511346 PHF23Q9BUL5 403 aaPredicted RBP23.47■■□□□ 1.35
AC012055.1-201ENST00000511346 FOXD1Q16676 465 aa22.16■■□□□ 1.14
AC012055.1-201ENST00000511346 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
AC012055.1-201ENST00000511346 MSH5O43196 834 aa20.76■□□□□ 0.91
AC012055.1-201ENST00000511346 PPP6R1Q9UPN7 881 aa20.7■□□□□ 0.9
AC012055.1-201ENST00000511346 PIAS4Q8N2W9 510 aaPredicted RBP20.69■□□□□ 0.9
AC012055.1-201ENST00000511346 ADRA2BP18089 450 aa20.62■□□□□ 0.89
AC012055.1-201ENST00000511346 POTEDQ86YR6 584 aa20.27■□□□□ 0.84
AC012055.1-201ENST00000511346 MAPK8IP2Q13387 824 aaPredicted RBP18.95■□□□□ 0.62
AC012055.1-201ENST00000511346 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
AC012055.1-201ENST00000511346 DMRT2Q9Y5R5 561 aa18.85■□□□□ 0.61
AC012055.1-201ENST00000511346 PPP4R3CPQ6ZMV5 832 aa18.52■□□□□ 0.56
AC012055.1-201ENST00000511346 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
AC012055.1-201ENST00000511346 HOXD11P31277 338 aaPredicted RBP18.17■□□□□ 0.5
AC012055.1-201ENST00000511346 DCAF8L1A6NGE4 600 aa18.05■□□□□ 0.48
AC012055.1-201ENST00000511346 RNF216Q9NWF9 866 aaPredicted RBP18.02■□□□□ 0.48
AC012055.1-201ENST00000511346 CACNB1Q02641 598 aaPredicted RBP17.81■□□□□ 0.44
AC012055.1-201ENST00000511346 NCBP3Q53F19 620 aaKnown RBP17.81■□□□□ 0.44
AC012055.1-201ENST00000511346 RNF39Q9H2S5 420 aa17.7■□□□□ 0.42
AC012055.1-201ENST00000511346 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
AC012055.1-201ENST00000511346 NPM3O75607 178 aaKnown RBP17.53■□□□□ 0.4
AC012055.1-201ENST00000511346 C1QBPQ07021 282 aaKnown RBP17.46■□□□□ 0.39
AC012055.1-201ENST00000511346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
AC012055.1-201ENST00000511346 KCNA4P22459 653 aa17.18■□□□□ 0.34
AC012055.1-201ENST00000511346 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
AC012055.1-201ENST00000511346 SLC4A2P04920 1241 aa16.75■□□□□ 0.27
AC012055.1-201ENST00000511346 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
AC012055.1-201ENST00000511346 CAPN15O75808 1086 aa16.65■□□□□ 0.26
AC012055.1-201ENST00000511346 DSG3P32926 999 aa16.57■□□□□ 0.24
AC012055.1-201ENST00000511346 APLP2Q06481 763 aa16.48■□□□□ 0.23
AC012055.1-201ENST00000511346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
AC012055.1-201ENST00000511346 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
AC012055.1-201ENST00000511346 TRHP20396 242 aaPredicted RBP16.38■□□□□ 0.21
AC012055.1-201ENST00000511346 ZNF219Q9P2Y4 722 aaPredicted RBP16.37■□□□□ 0.21
AC012055.1-201ENST00000511346 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
AC012055.1-201ENST00000511346 ABCB7O75027 752 aa16.25■□□□□ 0.19
AC012055.1-201ENST00000511346 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
AC012055.1-201ENST00000511346 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
AC012055.1-201ENST00000511346 FOXD4L1Q9NU39 408 aa16.05■□□□□ 0.16
AC012055.1-201ENST00000511346 POLA2Q14181 598 aa15.94■□□□□ 0.14
AC012055.1-201ENST00000511346 POTEHQ6S545 545 aa15.89■□□□□ 0.13
AC012055.1-201ENST00000511346 ATF5Q9Y2D1 282 aaPredicted RBP15.84■□□□□ 0.13
AC012055.1-201ENST00000511346 RBM42Q9BTD8 480 aaKnown RBP15.83■□□□□ 0.12
AC012055.1-201ENST00000511346 ZBTB22O15209 634 aa15.77■□□□□ 0.12
AC012055.1-201ENST00000511346 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
AC012055.1-201ENST00000511346 ATXN8OSP0DMR3 200 aa15.58■□□□□ 0.08
AC012055.1-201ENST00000511346 CHRDL2Q6WN34 429 aa15.47■□□□□ 0.07
AC012055.1-201ENST00000511346 AKT1S1Q96B36 256 aa15.46■□□□□ 0.07
AC012055.1-201ENST00000511346 OSCARQ8IYS5 282 aa15.42■□□□□ 0.06
AC012055.1-201ENST00000511346 REM2Q8IYK8 340 aaPredicted RBP15.3■□□□□ 0.04
AC012055.1-201ENST00000511346 FBLN2P98095 1184 aa15.24■□□□□ 0.03
AC012055.1-201ENST00000511346 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
AC012055.1-201ENST00000511346 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
AC012055.1-201ENST00000511346 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
AC012055.1-201ENST00000511346 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
AC012055.1-201ENST00000511346 MKRN4PQ13434 485 aaPredicted RBP15.11■□□□□ 0.01
AC012055.1-201ENST00000511346 PIP4P2Q8N4L2 257 aa15.1■□□□□ 0.01
AC012055.1-201ENST00000511346 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
AC012055.1-201ENST00000511346 FXR2P51116 673 aaKnown RBP eCLIP15.02■□□□□ -0
AC012055.1-201ENST00000511346 ZNF692Q9BU19 519 aaPredicted RBP14.96□□□□□ -0.01
AC012055.1-201ENST00000511346 SSUH2Q9Y2M2 353 aa14.94□□□□□ -0.02
AC012055.1-201ENST00000511346 SPDYE1Q8NFV5 336 aaPredicted RBP14.89□□□□□ -0.03
AC012055.1-201ENST00000511346 SP7Q8TDD2 431 aaPredicted RBP14.89□□□□□ -0.03
AC012055.1-201ENST00000511346 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
AC012055.1-201ENST00000511346 CLEC11AQ9Y240 323 aa14.85□□□□□ -0.03
AC012055.1-201ENST00000511346 HAX1O00165 279 aa14.83□□□□□ -0.04
AC012055.1-201ENST00000511346 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
AC012055.1-201ENST00000511346 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
AC012055.1-201ENST00000511346 EVX2Q03828 476 aa14.64□□□□□ -0.07
AC012055.1-201ENST00000511346 PRR29P0C7W0 189 aa14.61□□□□□ -0.07
AC012055.1-201ENST00000511346 CHADLQ6NUI6 762 aa14.56□□□□□ -0.08
AC012055.1-201ENST00000511346 C19orf67A6NJJ6 358 aa14.53□□□□□ -0.08
AC012055.1-201ENST00000511346 SPDYE4A6NLX3 237 aa14.4□□□□□ -0.1
AC012055.1-201ENST00000511346 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
AC012055.1-201ENST00000511346 STAG3Q9UJ98 1225 aa14.35□□□□□ -0.11
AC012055.1-201ENST00000511346 GABBR2O75899 941 aa14.32□□□□□ -0.12
AC012055.1-201ENST00000511346 CD44P16070 742 aaKnown RBP14.27□□□□□ -0.13
AC012055.1-201ENST00000511346 CREBZFQ9NS37 354 aa14.24□□□□□ -0.13
AC012055.1-201ENST00000511346 CLCN6P51797 869 aa14.13□□□□□ -0.15
AC012055.1-201ENST00000511346 ZNF579Q8NAF0 562 aaKnown RBP14.07□□□□□ -0.16
AC012055.1-201ENST00000511346 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
AC012055.1-201ENST00000511346 PROM2Q8N271 834 aa14.06□□□□□ -0.16
AC012055.1-201ENST00000511346 POTEIP0CG38 1075 aa14.01□□□□□ -0.17
AC012055.1-201ENST00000511346 MNX1P50219 401 aaPredicted RBP14□□□□□ -0.17
AC012055.1-201ENST00000511346 NPM1P06748 294 aaKnown RBP eCLIP13.99□□□□□ -0.17
AC012055.1-201ENST00000511346 PAK3O75914 559 aaPredicted RBP13.96□□□□□ -0.17
AC012055.1-201ENST00000511346 LHX8Q68G74 356 aa13.96□□□□□ -0.17
AC012055.1-201ENST00000511346 DCBLD2Q96PD2 775 aa13.93□□□□□ -0.18
AC012055.1-201ENST00000511346 GALR2O43603 387 aaPredicted RBP13.88□□□□□ -0.19
AC012055.1-201ENST00000511346 PHF12Q96QT6 1004 aa13.86□□□□□ -0.19
AC012055.1-201ENST00000511346 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
AC012055.1-201ENST00000511346 MIER1Q8N108 512 aa13.73□□□□□ -0.21
AC012055.1-201ENST00000511346 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
AC012055.1-201ENST00000511346 MS4A3Q96HJ5 214 aa13.69□□□□□ -0.22
AC012055.1-201ENST00000511346 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
AC012055.1-201ENST00000511346 FKBP8Q14318 412 aa13.65□□□□□ -0.22
AC012055.1-201ENST00000511346 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms