RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 PELP1Q8IZL8 1130 aaKnown RBP13.5□□□□□ -0.25
TRPS1-203ENST00000395715 DCAF8L2P0C7V8 631 aa13.11□□□□□ -0.31
TRPS1-203ENST00000395715 ERICH6Q7L0X2 663 aa13.03□□□□□ -0.32
TRPS1-203ENST00000395715 MYT1Q01538 1121 aa13.02□□□□□ -0.33
TRPS1-203ENST00000395715 CCER1Q8TC90 406 aaPredicted RBP12.85□□□□□ -0.35
TRPS1-203ENST00000395715 CENPBP07199 599 aaPredicted RBP12.48□□□□□ -0.41
TRPS1-203ENST00000395715 YTHDC1Q96MU7 727 aaKnown RBP12.48□□□□□ -0.41
TRPS1-203ENST00000395715 TTBK1Q5TCY1 1321 aaPredicted RBP12.47□□□□□ -0.41
TRPS1-203ENST00000395715 NEFLP07196 543 aa12.27□□□□□ -0.45
TRPS1-203ENST00000395715 DAXXQ9UER7 740 aaPredicted RBP12.23□□□□□ -0.45
TRPS1-203ENST00000395715 EHMT2Q96KQ7 1210 aa12.19□□□□□ -0.46
TRPS1-203ENST00000395715 APLP2Q06481 763 aa12.14□□□□□ -0.47
TRPS1-203ENST00000395715 SUPT5HO00267 1087 aaKnown RBP12.08□□□□□ -0.48
TRPS1-203ENST00000395715 RTL5Q5HYW3 569 aaPredicted RBP11.98□□□□□ -0.49
TRPS1-203ENST00000395715 ZEB1P37275 1124 aaPredicted RBP11.97□□□□□ -0.49
TRPS1-203ENST00000395715 PCGF6Q9BYE7 350 aa11.97□□□□□ -0.49
TRPS1-203ENST00000395715 FAM9AQ8IZU1 332 aaPredicted RBP11.94□□□□□ -0.5
TRPS1-203ENST00000395715 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
TRPS1-203ENST00000395715 SHROOM4Q9ULL8 1493 aa11.8□□□□□ -0.52
TRPS1-203ENST00000395715 GLIPR1L2Q4G1C9 344 aa11.75□□□□□ -0.53
TRPS1-203ENST00000395715 EIF5BO60841 1220 aaKnown RBP11.68□□□□□ -0.54
TRPS1-203ENST00000395715 ATP1B4Q9UN42 357 aaPredicted RBP11.67□□□□□ -0.54
TRPS1-203ENST00000395715 CLSPNQ9HAW4 1339 aa11.65□□□□□ -0.54
TRPS1-203ENST00000395715 RANGAP1P46060 587 aaPredicted RBP11.65□□□□□ -0.54
TRPS1-203ENST00000395715 POLR3GLQ9BT43 218 aa11.44□□□□□ -0.58
TRPS1-203ENST00000395715 MYT1LQ9UL68 1186 aa11.44□□□□□ -0.58
TRPS1-203ENST00000395715 ANP32BQ92688 251 aaKnown RBP11.41□□□□□ -0.58
TRPS1-203ENST00000395715 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
TRPS1-203ENST00000395715 CNGB1Q14028 1251 aaPredicted RBP11.35□□□□□ -0.59
TRPS1-203ENST00000395715 CHIC1Q5VXU3 224 aa11.34□□□□□ -0.59
TRPS1-203ENST00000395715 HRCP23327 699 aa11.32□□□□□ -0.6
TRPS1-203ENST00000395715 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
TRPS1-203ENST00000395715 SLC4A1APQ9BWU0 796 aaKnown RBP11.27□□□□□ -0.6
TRPS1-203ENST00000395715 ANP32AP39687 249 aaKnown RBP11.27□□□□□ -0.61
TRPS1-203ENST00000395715 BCANQ96GW7 911 aa11.25□□□□□ -0.61
TRPS1-203ENST00000395715 TNNT2P45379 298 aaPredicted RBP11.24□□□□□ -0.61
TRPS1-203ENST00000395715 UBTFP17480 764 aaKnown RBP11.21□□□□□ -0.61
TRPS1-203ENST00000395715 GTF3C3Q9Y5Q9 886 aa11.2□□□□□ -0.62
TRPS1-203ENST00000395715 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.18□□□□□ -0.62
TRPS1-203ENST00000395715 HNRNPUL2Q1KMD3 747 aaKnown RBP11.18□□□□□ -0.62
TRPS1-203ENST00000395715 DIEXFQ68CQ4 756 aaKnown RBP11.17□□□□□ -0.62
TRPS1-203ENST00000395715 TRIM26Q12899 539 aaPredicted RBP11.17□□□□□ -0.62
TRPS1-203ENST00000395715 CDK11BP21127 795 aaKnown RBP11.15□□□□□ -0.62
TRPS1-203ENST00000395715 BCL11AQ9H165 835 aa11.15□□□□□ -0.62
TRPS1-203ENST00000395715 HSP90AA1P07900 732 aaKnown RBP11.13□□□□□ -0.63
TRPS1-203ENST00000395715 TRIM41Q8WV44 630 aa11.13□□□□□ -0.63
TRPS1-203ENST00000395715 NISCHQ9Y2I1 1504 aa11.13□□□□□ -0.63
TRPS1-203ENST00000395715 PPARGC1BQ86YN6 1023 aaKnown RBP11.12□□□□□ -0.63
TRPS1-203ENST00000395715 NPM2Q86SE8 214 aaKnown RBP11.12□□□□□ -0.63
TRPS1-203ENST00000395715 CANXP27824 592 aaKnown RBP11.09□□□□□ -0.63
TRPS1-203ENST00000395715 ITGAEP38570 1179 aa11.07□□□□□ -0.64
TRPS1-203ENST00000395715 ARXQ96QS3 562 aa11.05□□□□□ -0.64
TRPS1-203ENST00000395715 NBR1Q14596 966 aa11.04□□□□□ -0.64
TRPS1-203ENST00000395715 SLC24A1O60721 1099 aa11.02□□□□□ -0.65
TRPS1-203ENST00000395715 TRIM44Q96DX7 344 aaPredicted RBP11.01□□□□□ -0.65
TRPS1-203ENST00000395715 UPF2Q9HAU5 1272 aaKnown RBP11□□□□□ -0.65
TRPS1-203ENST00000395715 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
TRPS1-203ENST00000395715 ANP32CO43423 234 aa10.95□□□□□ -0.66
TRPS1-203ENST00000395715 NEFMP07197 916 aa10.89□□□□□ -0.67
TRPS1-203ENST00000395715 NCLP19338 710 aaKnown RBP10.89□□□□□ -0.67
TRPS1-203ENST00000395715 DNTTIP2Q5QJE6 756 aaKnown RBP10.87□□□□□ -0.67
TRPS1-203ENST00000395715 NAP1L5Q96NT1 182 aaPredicted RBP10.86□□□□□ -0.67
TRPS1-203ENST00000395715 ZNF326Q5BKZ1 582 aaKnown RBP10.85□□□□□ -0.67
TRPS1-203ENST00000395715 ACIN1Q9UKV3 1341 aaKnown RBP10.83□□□□□ -0.67
TRPS1-203ENST00000395715 ERICH6BQ5W0A0 696 aa10.8□□□□□ -0.68
TRPS1-203ENST00000395715 ANP32EQ9BTT0 268 aa10.8□□□□□ -0.68
TRPS1-203ENST00000395715 PTMAP06454 111 aaKnown RBP10.79□□□□□ -0.68
TRPS1-203ENST00000395715 FKBP8Q14318 412 aa10.78□□□□□ -0.68
TRPS1-203ENST00000395715 CALRP27797 417 aaKnown RBP10.75□□□□□ -0.69
TRPS1-203ENST00000395715 RTN4Q9NQC3 1192 aaKnown RBP10.75□□□□□ -0.69
TRPS1-203ENST00000395715 NEUROD1Q13562 356 aa10.75□□□□□ -0.69
TRPS1-203ENST00000395715 TNNT3P45378 269 aaPredicted RBP10.73□□□□□ -0.69
TRPS1-203ENST00000395715 GOLGA6L22H0YM25 854 aa10.72□□□□□ -0.69
TRPS1-203ENST00000395715 ZRSR1Q15695 479 aaKnown RBP10.72□□□□□ -0.69
TRPS1-203ENST00000395715 TRIM52Q96A61 297 aa10.69□□□□□ -0.7
TRPS1-203ENST00000395715 PLPPR3Q6T4P5 718 aa10.69□□□□□ -0.7
TRPS1-203ENST00000395715 BECN1Q14457 450 aa10.68□□□□□ -0.7
TRPS1-203ENST00000395715 DDRGK1Q96HY6 314 aa10.68□□□□□ -0.7
TRPS1-203ENST00000395715 CCDC136Q96JN2 1154 aa10.67□□□□□ -0.7
TRPS1-203ENST00000395715 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.66□□□□□ -0.7
TRPS1-203ENST00000395715 CHAF1AQ13111 956 aaPredicted RBP10.66□□□□□ -0.7
TRPS1-203ENST00000395715 FAM50AQ14320 339 aaKnown RBP10.66□□□□□ -0.7
TRPS1-203ENST00000395715 GOLGA6L6A8MZA4 724 aa10.64□□□□□ -0.71
TRPS1-203ENST00000395715 TULP1O00294 542 aaPredicted RBP10.61□□□□□ -0.71
TRPS1-203ENST00000395715 FBLN2P98095 1184 aa10.61□□□□□ -0.71
TRPS1-203ENST00000395715 PLCB2Q00722 1185 aa10.58□□□□□ -0.72
TRPS1-203ENST00000395715 MSNP26038 577 aaKnown RBP10.58□□□□□ -0.72
TRPS1-203ENST00000395715 NRDCO43847 1150 aa10.58□□□□□ -0.72
TRPS1-203ENST00000395715 ARID4BQ4LE39 1312 aaPredicted RBP10.57□□□□□ -0.72
TRPS1-203ENST00000395715 TPRNQ4KMQ1 711 aa10.57□□□□□ -0.72
TRPS1-203ENST00000395715 HNRNPUQ00839 825 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRPS1-203ENST00000395715 MYH16Q9H6N6 1097 aa10.56□□□□□ -0.72
TRPS1-203ENST00000395715 NCBP3Q53F19 620 aaKnown RBP10.54□□□□□ -0.72
TRPS1-203ENST00000395715 ESF1Q9H501 851 aaKnown RBP10.53□□□□□ -0.72
TRPS1-203ENST00000395715 L1TD1Q5T7N2 865 aaKnown RBP10.53□□□□□ -0.72
TRPS1-203ENST00000395715 PPM1GO15355 546 aaPredicted RBP10.53□□□□□ -0.72
TRPS1-203ENST00000395715 LOC105371045A0A1W2PR82 267 aa10.52□□□□□ -0.73
TRPS1-203ENST00000395715 A0A0G2JS52 829 aa10.51□□□□□ -0.73
TRPS1-203ENST00000395715 PTMSP20962 102 aa10.51□□□□□ -0.73
TRPS1-203ENST00000395715 SETQ01105 290 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms