Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RPL4P3-201ENST00000428881 1311 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 LPCAT2BP-201ENST00000420263 1534 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 EYA3-201ENST00000373863 1729 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC010533.1-201ENST00000624875 2105 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 LRTOMT-201ENST00000289488 2332 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 LDHA-218ENST00000540430 2305 ntTSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 TSGA10-203ENST00000393483 3878 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 NR4A2-201ENST00000339562 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 C2orf42-201ENST00000264434 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 LINC01411-203ENST00000507361 2098 ntTSL 3 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 A4GNT-201ENST00000236709 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 RNU6-26P-201ENST00000383985 107 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 RNU6-831P-201ENST00000384548 107 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 MIR128-2-201ENST00000384893 84 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AL136116.1-201ENST00000403591 381 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 GAS8-AS1-201ENST00000408886 435 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AL671883.1-201ENST00000421191 306 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 CHCHD2P5-201ENST00000421414 400 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 DUTP6-201ENST00000425573 462 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 PSMD8P1-201ENST00000436275 769 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 RPS26P30-201ENST00000443431 335 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 RPL17P49-201ENST00000443728 411 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 FAR2P3-205ENST00000447059 604 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 TDRG1-204ENST00000451810 919 ntTSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 RN7SL587P-201ENST00000459853 281 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 RPSAP48-201ENST00000466509 889 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 OR7E28P-201ENST00000505191 975 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 POU5F1P7-201ENST00000508759 541 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC098591.2-201ENST00000510152 315 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC018797.3-201ENST00000513388 1241 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AP005902.2-201ENST00000518393 307 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC022861.1-201ENST00000522981 663 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 GTF2IP11-201ENST00000526931 420 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AP001189.2-201ENST00000527320 189 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 RRN3P3-201ENST00000549207 578 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 BNIP3P6-201ENST00000549284 499 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC144548.1-201ENST00000549577 324 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 FRG2GP-201ENST00000567870 615 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 TVP23CP2-201ENST00000571473 623 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 MIR3159-201ENST00000584572 74 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC010327.2-201ENST00000587647 488 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 EXOSC3P2-201ENST00000594464 497 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AP004607.9-201ENST00000618202 316 ntBASIC8.54□□□□□ -1.04
LHX6Q9UPM6 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 ALG13-226ENST00000622986 582 ntTSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 PFKM-203ENST00000359794 3228 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 CAPN3-206ENST00000397163 3228 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 CELF2-205ENST00000542579 7982 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 MAT2B-202ENST00000321757 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 TNFRSF19-201ENST00000248484 3276 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 CREM-212ENST00000374728 1933 ntTSL 5 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 NUP85-203ENST00000540768 1926 ntTSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 WDR92-202ENST00000406245 1401 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC8.54□□□□□ -1.04
LHX6Q9UPM6 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LHX6Q9UPM6 LINC01949-201ENST00000445770 2721 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LHX6Q9UPM6 SLC12A3-203ENST00000563236 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
LHX6Q9UPM6 LINC01120-201ENST00000437751 1861 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LHX6Q9UPM6 ADGRG1-216ENST00000562631 4042 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LHX6Q9UPM6 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
LHX6Q9UPM6 HAO2-202ENST00000361035 1668 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LHX6Q9UPM6 RAF1P1-201ENST00000508566 1696 ntBASIC8.53□□□□□ -1.04
LHX6Q9UPM6 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
LHX6Q9UPM6 IL1R1-203ENST00000409589 3544 ntTSL 5 BASIC8.53□□□□□ -1.04
LHX6Q9UPM6 LCA5-203ENST00000467898 2894 ntTSL 5 BASIC8.53□□□□□ -1.04
LHX6Q9UPM6 MAGEE2-201ENST00000373359 2249 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
LHX6Q9UPM6 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LHX6Q9UPM6 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms