RNA–Protein interactions for RNA: ENST00000443728.1

RPL17P49-201, Transcript of ribosomal protein L17 pseudogene 49, humanhuman

BASIC

Gene RPL17P49, Length 411 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17P49-201ENST00000443728 AEBP2Q6ZN18 517 aaPredicted RBP18.91■□□□□ 0.62
RPL17P49-201ENST00000443728 CHIC1Q5VXU3 224 aa18.55■□□□□ 0.56
RPL17P49-201ENST00000443728 PHF23Q9BUL5 403 aaPredicted RBP16.32■□□□□ 0.2
RPL17P49-201ENST00000443728 SENP3Q9H4L4 574 aaPredicted RBP16.06■□□□□ 0.16
RPL17P49-201ENST00000443728 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
RPL17P49-201ENST00000443728 FOXD1Q16676 465 aa14.89□□□□□ -0.03
RPL17P49-201ENST00000443728 PPP6R1Q9UPN7 881 aa14.38□□□□□ -0.11
RPL17P49-201ENST00000443728 ADRA2BP18089 450 aa14.37□□□□□ -0.11
RPL17P49-201ENST00000443728 PIAS4Q8N2W9 510 aaPredicted RBP14.06□□□□□ -0.16
RPL17P49-201ENST00000443728 MSH5O43196 834 aa13.72□□□□□ -0.21
RPL17P49-201ENST00000443728 PPP4R3CPQ6ZMV5 832 aa13.32□□□□□ -0.28
RPL17P49-201ENST00000443728 POTEDQ86YR6 584 aa13.27□□□□□ -0.29
RPL17P49-201ENST00000443728 SCAF1Q9H7N4 1312 aaKnown RBP13.19□□□□□ -0.3
RPL17P49-201ENST00000443728 KCNA4P22459 653 aa13.07□□□□□ -0.32
RPL17P49-201ENST00000443728 MAPK8IP2Q13387 824 aaPredicted RBP13.03□□□□□ -0.32
RPL17P49-201ENST00000443728 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
RPL17P49-201ENST00000443728 CNKSR2Q8WXI2 1034 aa12.94□□□□□ -0.34
RPL17P49-201ENST00000443728 DMRT2Q9Y5R5 561 aa12.82□□□□□ -0.36
RPL17P49-201ENST00000443728 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
RPL17P49-201ENST00000443728 RNF216Q9NWF9 866 aaPredicted RBP12.67□□□□□ -0.38
RPL17P49-201ENST00000443728 HOXD11P31277 338 aaPredicted RBP12.59□□□□□ -0.39
RPL17P49-201ENST00000443728 SLC4A1APQ9BWU0 796 aaKnown RBP12.47□□□□□ -0.41
RPL17P49-201ENST00000443728 DNAJC5BQ9UF47 199 aa12.42□□□□□ -0.42
RPL17P49-201ENST00000443728 DCAF8L1A6NGE4 600 aa12.28□□□□□ -0.44
RPL17P49-201ENST00000443728 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
RPL17P49-201ENST00000443728 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
RPL17P49-201ENST00000443728 CSRNP3Q8WYN3 585 aa12.02□□□□□ -0.49
RPL17P49-201ENST00000443728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.01□□□□□ -0.49
RPL17P49-201ENST00000443728 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
RPL17P49-201ENST00000443728 ZBTB22O15209 634 aa12□□□□□ -0.49
RPL17P49-201ENST00000443728 MYCNP04198 464 aaPredicted RBP11.82□□□□□ -0.52
RPL17P49-201ENST00000443728 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
RPL17P49-201ENST00000443728 RNF39Q9H2S5 420 aa11.75□□□□□ -0.53
RPL17P49-201ENST00000443728 CACNB1Q02641 598 aaPredicted RBP11.73□□□□□ -0.53
RPL17P49-201ENST00000443728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.71□□□□□ -0.53
RPL17P49-201ENST00000443728 HNRNPUL2Q1KMD3 747 aaKnown RBP11.71□□□□□ -0.53
RPL17P49-201ENST00000443728 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
RPL17P49-201ENST00000443728 C1QBPQ07021 282 aaKnown RBP11.64□□□□□ -0.55
RPL17P49-201ENST00000443728 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
RPL17P49-201ENST00000443728 APLP2Q06481 763 aa11.57□□□□□ -0.56
RPL17P49-201ENST00000443728 ATF5Q9Y2D1 282 aaPredicted RBP11.48□□□□□ -0.57
RPL17P49-201ENST00000443728 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
RPL17P49-201ENST00000443728 CAPN15O75808 1086 aa11.42□□□□□ -0.58
RPL17P49-201ENST00000443728 TRHP20396 242 aaPredicted RBP11.39□□□□□ -0.59
RPL17P49-201ENST00000443728 ZNF219Q9P2Y4 722 aaPredicted RBP11.38□□□□□ -0.59
RPL17P49-201ENST00000443728 POLA2Q14181 598 aa11.22□□□□□ -0.61
RPL17P49-201ENST00000443728 DSG3P32926 999 aa11.21□□□□□ -0.61
RPL17P49-201ENST00000443728 ABCB7O75027 752 aa11.19□□□□□ -0.62
RPL17P49-201ENST00000443728 ZBTB12Q9Y330 459 aaPredicted RBP11.04□□□□□ -0.64
RPL17P49-201ENST00000443728 FBLN2P98095 1184 aa11.03□□□□□ -0.64
RPL17P49-201ENST00000443728 MKRN4PQ13434 485 aaPredicted RBP10.99□□□□□ -0.65
RPL17P49-201ENST00000443728 FKBP8Q14318 412 aa10.86□□□□□ -0.67
RPL17P49-201ENST00000443728 SPDYE4A6NLX3 237 aa10.8□□□□□ -0.68
RPL17P49-201ENST00000443728 OSCARQ8IYS5 282 aa10.8□□□□□ -0.68
RPL17P49-201ENST00000443728 SPDYE2BA6NHP3 402 aa10.74□□□□□ -0.69
RPL17P49-201ENST00000443728 SPDYE6P0CI01 402 aa10.74□□□□□ -0.69
RPL17P49-201ENST00000443728 SPDYE2Q495Y8 402 aa10.74□□□□□ -0.69
RPL17P49-201ENST00000443728 ZNF692Q9BU19 519 aaPredicted RBP10.72□□□□□ -0.69
RPL17P49-201ENST00000443728 RBM42Q9BTD8 480 aaKnown RBP10.69□□□□□ -0.7
RPL17P49-201ENST00000443728 SSUH2Q9Y2M2 353 aa10.65□□□□□ -0.7
RPL17P49-201ENST00000443728 PROM2Q8N271 834 aa10.61□□□□□ -0.71
RPL17P49-201ENST00000443728 PABPN1Q86U42 306 aaKnown RBP eCLIP10.57□□□□□ -0.72
RPL17P49-201ENST00000443728 AKT1S1Q96B36 256 aa10.57□□□□□ -0.72
RPL17P49-201ENST00000443728 FBXO3Q9UK99 471 aa10.48□□□□□ -0.73
RPL17P49-201ENST00000443728 REM2Q8IYK8 340 aaPredicted RBP10.47□□□□□ -0.73
RPL17P49-201ENST00000443728 STAG3Q9UJ98 1225 aa10.44□□□□□ -0.74
RPL17P49-201ENST00000443728 SPDYE1Q8NFV5 336 aaPredicted RBP10.42□□□□□ -0.74
RPL17P49-201ENST00000443728 POTEHQ6S545 545 aa10.41□□□□□ -0.74
RPL17P49-201ENST00000443728 CLEC11AQ9Y240 323 aa10.37□□□□□ -0.75
RPL17P49-201ENST00000443728 PITPNM1O00562 1244 aa10.33□□□□□ -0.76
RPL17P49-201ENST00000443728 VASPP50552 380 aaPredicted RBP10.31□□□□□ -0.76
RPL17P49-201ENST00000443728 PRR29P0C7W0 189 aa10.3□□□□□ -0.76
RPL17P49-201ENST00000443728 MIER1Q8N108 512 aa10.26□□□□□ -0.77
RPL17P49-201ENST00000443728 CHRDL2Q6WN34 429 aa10.23□□□□□ -0.77
RPL17P49-201ENST00000443728 PLCD3Q8N3E9 789 aa10.23□□□□□ -0.77
RPL17P49-201ENST00000443728 PLEKHG5O94827 1062 aa10.2□□□□□ -0.78
RPL17P49-201ENST00000443728 IFNLR1Q8IU57 520 aaPredicted RBP10.18□□□□□ -0.78
RPL17P49-201ENST00000443728 KLHL34Q8N239 644 aa10.15□□□□□ -0.78
RPL17P49-201ENST00000443728 CREBZFQ9NS37 354 aa10.15□□□□□ -0.78
RPL17P49-201ENST00000443728 FXR2P51116 673 aaKnown RBP eCLIP10.14□□□□□ -0.79
RPL17P49-201ENST00000443728 ZBTB47Q9UFB7 747 aaPredicted RBP10.12□□□□□ -0.79
RPL17P49-201ENST00000443728 PIP4P2Q8N4L2 257 aa10.09□□□□□ -0.79
RPL17P49-201ENST00000443728 PRKAR2AP13861 404 aaKnown RBP10.08□□□□□ -0.8
RPL17P49-201ENST00000443728 CHADLQ6NUI6 762 aa10.08□□□□□ -0.8
RPL17P49-201ENST00000443728 SPOCK2Q92563 424 aa10.06□□□□□ -0.8
RPL17P49-201ENST00000443728 MNX1P50219 401 aaPredicted RBP10.05□□□□□ -0.8
RPL17P49-201ENST00000443728 AMER1Q5JTC6 1135 aaPredicted RBP10.02□□□□□ -0.81
RPL17P49-201ENST00000443728 FARP1Q9Y4F1 1045 aaPredicted RBP10.02□□□□□ -0.81
RPL17P49-201ENST00000443728 NPM1P06748 294 aaKnown RBP eCLIP10.01□□□□□ -0.81
RPL17P49-201ENST00000443728 RTN4Q9NQC3 1192 aaKnown RBP9.97□□□□□ -0.81
RPL17P49-201ENST00000443728 NUBP1P53384 320 aa9.96□□□□□ -0.82
RPL17P49-201ENST00000443728 DCAF8Q5TAQ9 597 aa9.9□□□□□ -0.82
RPL17P49-201ENST00000443728 CIZ1Q9ULV3 898 aaPredicted RBP9.9□□□□□ -0.82
RPL17P49-201ENST00000443728 GSE1Q14687 1217 aa9.89□□□□□ -0.83
RPL17P49-201ENST00000443728 RASEFQ8IZ41 740 aa9.89□□□□□ -0.83
RPL17P49-201ENST00000443728 FAM212AQ96EL1 285 aa9.88□□□□□ -0.83
RPL17P49-201ENST00000443728 PKD2Q13563 968 aa9.86□□□□□ -0.83
RPL17P49-201ENST00000443728 TSPYL2Q9H2G4 693 aaPredicted RBP9.83□□□□□ -0.84
RPL17P49-201ENST00000443728 PAK3O75914 559 aaPredicted RBP9.82□□□□□ -0.84
RPL17P49-201ENST00000443728 HAX1O00165 279 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms