RNA–Protein interactions for RNA: ENST00000549207.1

RRN3P3-201, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 3, humanhuman

BASIC

Gene RRN3P3, Length 578 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P3-201ENST00000549207 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
RRN3P3-201ENST00000549207 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
RRN3P3-201ENST00000549207 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
RRN3P3-201ENST00000549207 PHF23Q9BUL5 403 aaPredicted RBP17.52■□□□□ 0.4
RRN3P3-201ENST00000549207 FOXD1Q16676 465 aa16.69■□□□□ 0.26
RRN3P3-201ENST00000549207 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
RRN3P3-201ENST00000549207 MSH5O43196 834 aa15.78■□□□□ 0.12
RRN3P3-201ENST00000549207 PIAS4Q8N2W9 510 aaPredicted RBP15.43■□□□□ 0.06
RRN3P3-201ENST00000549207 PPP6R1Q9UPN7 881 aa15.24■□□□□ 0.03
RRN3P3-201ENST00000549207 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
RRN3P3-201ENST00000549207 ADRA2BP18089 450 aa15.13■□□□□ 0.01
RRN3P3-201ENST00000549207 MAPK8IP2Q13387 824 aaPredicted RBP14.06□□□□□ -0.16
RRN3P3-201ENST00000549207 DMRT2Q9Y5R5 561 aa14.06□□□□□ -0.16
RRN3P3-201ENST00000549207 CACNB1Q02641 598 aaPredicted RBP13.84□□□□□ -0.19
RRN3P3-201ENST00000549207 SCAF1Q9H7N4 1312 aaKnown RBP13.8□□□□□ -0.2
RRN3P3-201ENST00000549207 RNF39Q9H2S5 420 aa13.46□□□□□ -0.25
RRN3P3-201ENST00000549207 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
RRN3P3-201ENST00000549207 HOXD11P31277 338 aaPredicted RBP13.36□□□□□ -0.27
RRN3P3-201ENST00000549207 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
RRN3P3-201ENST00000549207 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
RRN3P3-201ENST00000549207 RNF216Q9NWF9 866 aaPredicted RBP13.1□□□□□ -0.31
RRN3P3-201ENST00000549207 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
RRN3P3-201ENST00000549207 DNAJC5BQ9UF47 199 aa13.01□□□□□ -0.33
RRN3P3-201ENST00000549207 POTEHQ6S545 545 aa12.66□□□□□ -0.38
RRN3P3-201ENST00000549207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.66□□□□□ -0.383e-9■■□□□ 13.8
RRN3P3-201ENST00000549207 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
RRN3P3-201ENST00000549207 DSG3P32926 999 aa12.42□□□□□ -0.42
RRN3P3-201ENST00000549207 U3KPZ7 1027 aaPredicted RBP12.39□□□□□ -0.43
RRN3P3-201ENST00000549207 NPM3O75607 178 aaKnown RBP12.38□□□□□ -0.43
RRN3P3-201ENST00000549207 SPINK5Q9NQ38 1064 aaPredicted RBP12.36□□□□□ -0.43
RRN3P3-201ENST00000549207 CAPN15O75808 1086 aa12.32□□□□□ -0.44
RRN3P3-201ENST00000549207 ABCB7O75027 752 aa12□□□□□ -0.49
RRN3P3-201ENST00000549207 TRHP20396 242 aaPredicted RBP12□□□□□ -0.49
RRN3P3-201ENST00000549207 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
RRN3P3-201ENST00000549207 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
RRN3P3-201ENST00000549207 APLP2Q06481 763 aa11.92□□□□□ -0.5
RRN3P3-201ENST00000549207 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
RRN3P3-201ENST00000549207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.81□□□□□ -0.52
RRN3P3-201ENST00000549207 HNRNPUL2Q1KMD3 747 aaKnown RBP11.81□□□□□ -0.52
RRN3P3-201ENST00000549207 CHRDL2Q6WN34 429 aa11.79□□□□□ -0.52
RRN3P3-201ENST00000549207 SAMD1Q6SPF0 538 aaPredicted RBP11.73□□□□□ -0.53
RRN3P3-201ENST00000549207 KCNA4P22459 653 aa11.69□□□□□ -0.54
RRN3P3-201ENST00000549207 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
RRN3P3-201ENST00000549207 POLA2Q14181 598 aa11.59□□□□□ -0.55
RRN3P3-201ENST00000549207 AKT1S1Q96B36 256 aa11.46□□□□□ -0.57
RRN3P3-201ENST00000549207 MYCNP04198 464 aaPredicted RBP11.43□□□□□ -0.58
RRN3P3-201ENST00000549207 PIP4P2Q8N4L2 257 aa11.41□□□□□ -0.58
RRN3P3-201ENST00000549207 REM2Q8IYK8 340 aaPredicted RBP11.36□□□□□ -0.59
RRN3P3-201ENST00000549207 HAX1O00165 279 aa11.31□□□□□ -0.6
RRN3P3-201ENST00000549207 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
RRN3P3-201ENST00000549207 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.61
RRN3P3-201ENST00000549207 ATF5Q9Y2D1 282 aaPredicted RBP11.26□□□□□ -0.61
RRN3P3-201ENST00000549207 PITPNM1O00562 1244 aa11.25□□□□□ -0.61
RRN3P3-201ENST00000549207 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
RRN3P3-201ENST00000549207 EVX2Q03828 476 aa11.19□□□□□ -0.62
RRN3P3-201ENST00000549207 FOXD4L1Q9NU39 408 aa11.04□□□□□ -0.64
RRN3P3-201ENST00000549207 C19orf67A6NJJ6 358 aa10.93□□□□□ -0.66
RRN3P3-201ENST00000549207 PRKAR2AP13861 404 aaKnown RBP10.93□□□□□ -0.66
RRN3P3-201ENST00000549207 SPDYE2BA6NHP3 402 aa10.92□□□□□ -0.66
RRN3P3-201ENST00000549207 SPDYE6P0CI01 402 aa10.92□□□□□ -0.66
RRN3P3-201ENST00000549207 SPDYE2Q495Y8 402 aa10.92□□□□□ -0.66
RRN3P3-201ENST00000549207 SLC4A1APQ9BWU0 796 aaKnown RBP10.9□□□□□ -0.66
RRN3P3-201ENST00000549207 LHX8Q68G74 356 aa10.89□□□□□ -0.67
RRN3P3-201ENST00000549207 GABBR2O75899 941 aa10.88□□□□□ -0.67
RRN3P3-201ENST00000549207 SPDYE1Q8NFV5 336 aaPredicted RBP10.84□□□□□ -0.67
RRN3P3-201ENST00000549207 CLEC11AQ9Y240 323 aa10.83□□□□□ -0.68
RRN3P3-201ENST00000549207 FBLN2P98095 1184 aa10.78□□□□□ -0.68
RRN3P3-201ENST00000549207 ATXN8OSP0DMR3 200 aa10.77□□□□□ -0.69
RRN3P3-201ENST00000549207 ZBTB22O15209 634 aa10.76□□□□□ -0.69
RRN3P3-201ENST00000549207 SSUH2Q9Y2M2 353 aa10.74□□□□□ -0.69
RRN3P3-201ENST00000549207 MKRN4PQ13434 485 aaPredicted RBP10.71□□□□□ -0.69
RRN3P3-201ENST00000549207 CHADLQ6NUI6 762 aa10.7□□□□□ -0.7
RRN3P3-201ENST00000549207 ZNF692Q9BU19 519 aaPredicted RBP10.69□□□□□ -0.7
RRN3P3-201ENST00000549207 POTEIP0CG38 1075 aa10.68□□□□□ -0.7
RRN3P3-201ENST00000549207 PRR29P0C7W0 189 aa10.59□□□□□ -0.71
RRN3P3-201ENST00000549207 PLSCR2Q9NRY7 297 aa10.58□□□□□ -0.72
RRN3P3-201ENST00000549207 CD44P16070 742 aaKnown RBP10.55□□□□□ -0.72
RRN3P3-201ENST00000549207 CLCN6P51797 869 aa10.52□□□□□ -0.73
RRN3P3-201ENST00000549207 PABPN1Q86U42 306 aaKnown RBP eCLIP10.52□□□□□ -0.73
RRN3P3-201ENST00000549207 FARP1Q9Y4F1 1045 aaPredicted RBP10.51□□□□□ -0.73
RRN3P3-201ENST00000549207 DCBLD2Q96PD2 775 aa10.43□□□□□ -0.74
RRN3P3-201ENST00000549207 ZNF579Q8NAF0 562 aaKnown RBP10.39□□□□□ -0.75
RRN3P3-201ENST00000549207 OTUD5Q96G74 571 aa10.37□□□□□ -0.75
RRN3P3-201ENST00000549207 POTEB2H3BUK9 544 aa10.32□□□□□ -0.76
RRN3P3-201ENST00000549207 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
RRN3P3-201ENST00000549207 GALR2O43603 387 aaPredicted RBP10.3□□□□□ -0.76
RRN3P3-201ENST00000549207 POTEMA6NI47 508 aa10.28□□□□□ -0.76
RRN3P3-201ENST00000549207 CREBZFQ9NS37 354 aa10.24□□□□□ -0.77
RRN3P3-201ENST00000549207 POTEGQ6S5H5 508 aa10.23□□□□□ -0.77
RRN3P3-201ENST00000549207 PELP1Q8IZL8 1130 aaKnown RBP10.17□□□□□ -0.78
RRN3P3-201ENST00000549207 PHF12Q96QT6 1004 aa10.15□□□□□ -0.78
RRN3P3-201ENST00000549207 PCDH10Q9P2E7 1040 aa10.14□□□□□ -0.79
RRN3P3-201ENST00000549207 STAG3Q9UJ98 1225 aa10.11□□□□□ -0.79
RRN3P3-201ENST00000549207 POTEJP0CG39 1038 aa10.1□□□□□ -0.79
RRN3P3-201ENST00000549207 PAK3O75914 559 aaPredicted RBP10.09□□□□□ -0.79
RRN3P3-201ENST00000549207 LCE2DQ5TA82 110 aaPredicted RBP10.06□□□□□ -0.8
RRN3P3-201ENST00000549207 ASTLQ6HA08 431 aaPredicted RBP10.06□□□□□ -0.8
RRN3P3-201ENST00000549207 METRNQ9UJH8 293 aa10.05□□□□□ -0.8
RRN3P3-201ENST00000549207 MNX1P50219 401 aaPredicted RBP10.04□□□□□ -0.8
RRN3P3-201ENST00000549207 ATMINO43313 823 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms