Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.87□□□□□ -1.31
CCDC33Q8N5R6 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC33Q8N5R6 MIR6778-201ENST00000617912 73 ntBASIC6.87□□□□□ -1.31
CCDC33Q8N5R6 OR1N1-202ENST00000619659 939 ntBASIC6.87□□□□□ -1.31
CCDC33Q8N5R6 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.87□□□□□ -1.31
CCDC33Q8N5R6 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC33Q8N5R6 AC119674.1-220ENST00000641502 1048 ntBASIC6.87□□□□□ -1.31
CCDC33Q8N5R6 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC33Q8N5R6 CUBNP3-201ENST00000457461 1784 ntBASIC6.87□□□□□ -1.31
CCDC33Q8N5R6 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC33Q8N5R6 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
CCDC33Q8N5R6 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC33Q8N5R6 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC33Q8N5R6 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 LCOR-201ENST00000286067 4542 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 OR2M1P-201ENST00000318104 951 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 RNA5SP321-201ENST00000362722 111 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 Y_RNA.110-201ENST00000363220 99 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 RNA5SP279-201ENST00000365513 117 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 RPS21P8-201ENST00000413365 247 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 RPS7P12-201ENST00000422385 582 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 GPN3P1-201ENST00000423883 535 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 AC245452.2-201ENST00000435222 392 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 RAB9AP5-201ENST00000437794 597 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 RAB9AP2-201ENST00000443911 597 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 CCNJP2-201ENST00000457810 1163 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 AC021006.1-201ENST00000489849 553 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 MTND1P36-201ENST00000522384 936 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 GTF2IP11-201ENST00000526931 420 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 AC005363.1-201ENST00000530779 351 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 OR1E3-201ENST00000575608 948 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 AL953862.2-201ENST00000603089 820 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 AC020978.9-201ENST00000624380 1141 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 MTCO1P25-201ENST00000414449 1799 ntBASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
CCDC33Q8N5R6 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 RNA5SP333-201ENST00000363466 118 ntBASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 RNA5SP334-201ENST00000364825 118 ntBASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 AL353625.1-202ENST00000366273 571 ntBASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 U3.52-201ENST00000384034 216 ntBASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 AL391419.1-201ENST00000398901 1275 ntBASIC6.85□□□□□ -1.31
CCDC33Q8N5R6 MIR1282-201ENST00000408865 101 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms