RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 MYT1Q01538 1121 aa11.33□□□□□ -0.6
PCDH18-201ENST00000344876 DCAF8L2P0C7V8 631 aa11.11□□□□□ -0.63
PCDH18-201ENST00000344876 PELP1Q8IZL8 1130 aaKnown RBP11.07□□□□□ -0.64
PCDH18-201ENST00000344876 TTBK1Q5TCY1 1321 aaPredicted RBP10.75□□□□□ -0.69
PCDH18-201ENST00000344876 EHMT2Q96KQ7 1210 aa10.7□□□□□ -0.7
PCDH18-201ENST00000344876 SUPT5HO00267 1087 aaKnown RBP10.65□□□□□ -0.7
PCDH18-201ENST00000344876 ERICH6Q7L0X2 663 aa10.58□□□□□ -0.72
PCDH18-201ENST00000344876 SHROOM4Q9ULL8 1493 aa10.32□□□□□ -0.76
PCDH18-201ENST00000344876 RANGAP1P46060 587 aaPredicted RBP10.23□□□□□ -0.77
PCDH18-201ENST00000344876 PCGF6Q9BYE7 350 aa10.22□□□□□ -0.77
PCDH18-201ENST00000344876 FAM9AQ8IZU1 332 aaPredicted RBP10.17□□□□□ -0.78
PCDH18-201ENST00000344876 SLC24A1O60721 1099 aa10.13□□□□□ -0.79
PCDH18-201ENST00000344876 APLP2Q06481 763 aa10.12□□□□□ -0.79
PCDH18-201ENST00000344876 YTHDC1Q96MU7 727 aaKnown RBP10.1□□□□□ -0.79
PCDH18-201ENST00000344876 CCER1Q8TC90 406 aaPredicted RBP10.1□□□□□ -0.79
PCDH18-201ENST00000344876 CENPBP07199 599 aaPredicted RBP10.08□□□□□ -0.8
PCDH18-201ENST00000344876 NEFLP07196 543 aa9.89□□□□□ -0.83
PCDH18-201ENST00000344876 ATP1B4Q9UN42 357 aaPredicted RBP9.89□□□□□ -0.83
PCDH18-201ENST00000344876 PPARGC1BQ86YN6 1023 aaKnown RBP9.86□□□□□ -0.83
PCDH18-201ENST00000344876 GLIPR1L2Q4G1C9 344 aa9.8□□□□□ -0.84
PCDH18-201ENST00000344876 ZEB1P37275 1124 aaPredicted RBP9.79□□□□□ -0.84
PCDH18-201ENST00000344876 CNGB1Q14028 1251 aaPredicted RBP9.76□□□□□ -0.85
PCDH18-201ENST00000344876 DAXXQ9UER7 740 aaPredicted RBP9.71□□□□□ -0.86
PCDH18-201ENST00000344876 POLR3GLQ9BT43 218 aa9.69□□□□□ -0.86
PCDH18-201ENST00000344876 TRIM41Q8WV44 630 aa9.68□□□□□ -0.86
PCDH18-201ENST00000344876 UBTFP17480 764 aaKnown RBP9.67□□□□□ -0.86
PCDH18-201ENST00000344876 EIF5BO60841 1220 aaKnown RBP9.66□□□□□ -0.86
PCDH18-201ENST00000344876 ITGAEP38570 1179 aa9.61□□□□□ -0.87
PCDH18-201ENST00000344876 HRCP23327 699 aa9.6□□□□□ -0.87
PCDH18-201ENST00000344876 RTL5Q5HYW3 569 aaPredicted RBP9.56□□□□□ -0.88
PCDH18-201ENST00000344876 BCANQ96GW7 911 aa9.51□□□□□ -0.89
PCDH18-201ENST00000344876 CHIC1Q5VXU3 224 aa9.49□□□□□ -0.89
PCDH18-201ENST00000344876 ZNF316A6NFI3 1004 aaPredicted RBP9.49□□□□□ -0.89
PCDH18-201ENST00000344876 HNRNPUL2Q1KMD3 747 aaKnown RBP9.48□□□□□ -0.89
PCDH18-201ENST00000344876 TRIM26Q12899 539 aaPredicted RBP9.48□□□□□ -0.89
PCDH18-201ENST00000344876 CLSPNQ9HAW4 1339 aa9.48□□□□□ -0.89
PCDH18-201ENST00000344876 MYT1LQ9UL68 1186 aa9.45□□□□□ -0.9
PCDH18-201ENST00000344876 NISCHQ9Y2I1 1504 aa9.45□□□□□ -0.9
PCDH18-201ENST00000344876 LOC105371045A0A1W2PR82 267 aa9.44□□□□□ -0.9
PCDH18-201ENST00000344876 SLC4A1APQ9BWU0 796 aaKnown RBP9.44□□□□□ -0.9
PCDH18-201ENST00000344876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.41□□□□□ -0.9
PCDH18-201ENST00000344876 BCL11AQ9H165 835 aa9.4□□□□□ -0.91
PCDH18-201ENST00000344876 DIEXFQ68CQ4 756 aaKnown RBP9.39□□□□□ -0.91
PCDH18-201ENST00000344876 GTF3C3Q9Y5Q9 886 aa9.39□□□□□ -0.91
PCDH18-201ENST00000344876 NEUROD1Q13562 356 aa9.26□□□□□ -0.93
PCDH18-201ENST00000344876 PRKCSHP14314 528 aaPredicted RBP9.25□□□□□ -0.93
PCDH18-201ENST00000344876 CDK11AQ9UQ88 783 aaPredicted RBP9.23□□□□□ -0.93
PCDH18-201ENST00000344876 NPM2Q86SE8 214 aaKnown RBP9.23□□□□□ -0.93
PCDH18-201ENST00000344876 PODXL2Q9NZ53 605 aa9.23□□□□□ -0.93
PCDH18-201ENST00000344876 ZNF326Q5BKZ1 582 aaKnown RBP9.21□□□□□ -0.93
PCDH18-201ENST00000344876 CDK11BP21127 795 aaKnown RBP9.19□□□□□ -0.94
PCDH18-201ENST00000344876 FAM50AQ14320 339 aaKnown RBP9.18□□□□□ -0.94
PCDH18-201ENST00000344876 TRIM52Q96A61 297 aa9.16□□□□□ -0.94
PCDH18-201ENST00000344876 TNNT2P45379 298 aaPredicted RBP9.15□□□□□ -0.95
PCDH18-201ENST00000344876 ARXQ96QS3 562 aa9.13□□□□□ -0.95
PCDH18-201ENST00000344876 ZBTB47Q9UFB7 747 aaPredicted RBP9.13□□□□□ -0.95
PCDH18-201ENST00000344876 ANP32CO43423 234 aa9.12□□□□□ -0.95
PCDH18-201ENST00000344876 CANXP27824 592 aaKnown RBP9.12□□□□□ -0.95
PCDH18-201ENST00000344876 NBR1Q14596 966 aa9.1□□□□□ -0.95
PCDH18-201ENST00000344876 ACIN1Q9UKV3 1341 aaKnown RBP9.09□□□□□ -0.95
PCDH18-201ENST00000344876 ANP32AP39687 249 aaKnown RBP9.09□□□□□ -0.95
PCDH18-201ENST00000344876 HAP1P54257 671 aaPredicted RBP9.08□□□□□ -0.96
PCDH18-201ENST00000344876 FKBP8Q14318 412 aa9.05□□□□□ -0.96
PCDH18-201ENST00000344876 NCLP19338 710 aaKnown RBP9.05□□□□□ -0.96
PCDH18-201ENST00000344876 AMER1Q5JTC6 1135 aaPredicted RBP9.04□□□□□ -0.96
PCDH18-201ENST00000344876 A0A0U1RQG5 324 aaPredicted RBP9.03□□□□□ -0.96
PCDH18-201ENST00000344876 C14orf37Q86TY3 774 aa9.01□□□□□ -0.97
PCDH18-201ENST00000344876 SALL2Q9Y467 1007 aaPredicted RBP9.01□□□□□ -0.97
PCDH18-201ENST00000344876 HSP90AA1P07900 732 aaKnown RBP8.99□□□□□ -0.97
PCDH18-201ENST00000344876 ANP32BQ92688 251 aaKnown RBP8.98□□□□□ -0.97
PCDH18-201ENST00000344876 ANP32EQ9BTT0 268 aa8.97□□□□□ -0.97
PCDH18-201ENST00000344876 ARID3CA6NKF2 412 aa8.96□□□□□ -0.97
PCDH18-201ENST00000344876 HOMEZQ8IX15 550 aa8.96□□□□□ -0.98
PCDH18-201ENST00000344876 PKNOX2Q96KN3 472 aa8.96□□□□□ -0.98
PCDH18-201ENST00000344876 TRIM44Q96DX7 344 aaPredicted RBP8.95□□□□□ -0.98
PCDH18-201ENST00000344876 IRX6P78412 446 aaPredicted RBP8.95□□□□□ -0.98
PCDH18-201ENST00000344876 FAM9BQ8IZU0 186 aa8.93□□□□□ -0.98
PCDH18-201ENST00000344876 PTMSP20962 102 aa8.93□□□□□ -0.98
PCDH18-201ENST00000344876 CALRP27797 417 aaKnown RBP8.93□□□□□ -0.98
PCDH18-201ENST00000344876 TULP1O00294 542 aaPredicted RBP8.92□□□□□ -0.98
PCDH18-201ENST00000344876 HNRNPUQ00839 825 aaKnown RBP eCLIP8.92□□□□□ -0.98
PCDH18-201ENST00000344876 NEFMP07197 916 aa8.9□□□□□ -0.98
PCDH18-201ENST00000344876 P3H3Q8IVL6 736 aa8.89□□□□□ -0.99
PCDH18-201ENST00000344876 RTN4Q9NQC3 1192 aaKnown RBP8.88□□□□□ -0.99
PCDH18-201ENST00000344876 DDX10Q13206 875 aaKnown RBP8.88□□□□□ -0.99
PCDH18-201ENST00000344876 SENP3-EIF4A1A0A087X0R7 540 aa8.87□□□□□ -0.99
PCDH18-201ENST00000344876 SCAF1Q9H7N4 1312 aaKnown RBP8.87□□□□□ -0.99
PCDH18-201ENST00000344876 APPP05067 770 aa8.85□□□□□ -0.99
PCDH18-201ENST00000344876 CCDC136Q96JN2 1154 aa8.85□□□□□ -0.99
PCDH18-201ENST00000344876 UPF2Q9HAU5 1272 aaKnown RBP8.85□□□□□ -0.99
PCDH18-201ENST00000344876 PDE4CQ08493 712 aa8.84□□□□□ -0.99
PCDH18-201ENST00000344876 TPRNQ4KMQ1 711 aa8.84□□□□□ -0.99
PCDH18-201ENST00000344876 FBLN2P98095 1184 aa8.83□□□□□ -1
PCDH18-201ENST00000344876 PLPPR3Q6T4P5 718 aa8.83□□□□□ -1
PCDH18-201ENST00000344876 NAP1L5Q96NT1 182 aaPredicted RBP8.82□□□□□ -1
PCDH18-201ENST00000344876 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.82□□□□□ -1
PCDH18-201ENST00000344876 ZNF777Q9ULD5 760 aaPredicted RBP8.82□□□□□ -1
PCDH18-201ENST00000344876 HIRIP3Q9BW71 556 aaPredicted RBP8.82□□□□□ -1
PCDH18-201ENST00000344876 ARID4BQ4LE39 1312 aaPredicted RBP8.8□□□□□ -1
PCDH18-201ENST00000344876 VSIG10Q8N0Z9 540 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 291.5 ms