RNA–Protein interactions for RNA: ENST00000636400.2

TCF4-278, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,343 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-278ENST00000636400 NISCHQ9Y2I1 1504 aa11.84□□□□□ -0.51
TCF4-278ENST00000636400 DCAF8L2P0C7V8 631 aa11.56□□□□□ -0.56
TCF4-278ENST00000636400 SUPT5HO00267 1087 aaKnown RBP10.95□□□□□ -0.66
TCF4-278ENST00000636400 SHROOM4Q9ULL8 1493 aa10.82□□□□□ -0.68
TCF4-278ENST00000636400 FAM9AQ8IZU1 332 aaPredicted RBP10.76□□□□□ -0.69
TCF4-278ENST00000636400 PELP1Q8IZL8 1130 aaKnown RBP10.71□□□□□ -0.69
TCF4-278ENST00000636400 APLP2Q06481 763 aa10.7□□□□□ -0.7
TCF4-278ENST00000636400 ZEB1P37275 1124 aaPredicted RBP10.4□□□□□ -0.74
TCF4-278ENST00000636400 TRIM41Q8WV44 630 aa10.35□□□□□ -0.75
TCF4-278ENST00000636400 EHMT2Q96KQ7 1210 aa10.33□□□□□ -0.76
TCF4-278ENST00000636400 CCDC180Q9P1Z9 1646 aa10.32□□□□□ -0.76
TCF4-278ENST00000636400 CENPBP07199 599 aaPredicted RBP10.22□□□□□ -0.77
TCF4-278ENST00000636400 CCER1Q8TC90 406 aaPredicted RBP10.21□□□□□ -0.78
TCF4-278ENST00000636400 UBTFP17480 764 aaKnown RBP10.2□□□□□ -0.78
TCF4-278ENST00000636400 PCGF6Q9BYE7 350 aa10.19□□□□□ -0.78
TCF4-278ENST00000636400 ATP1B4Q9UN42 357 aaPredicted RBP10.1□□□□□ -0.79
TCF4-278ENST00000636400 TTBK1Q5TCY1 1321 aaPredicted RBP10.04□□□□□ -0.8
TCF4-278ENST00000636400 RANGAP1P46060 587 aaPredicted RBP10.03□□□□□ -0.8
TCF4-278ENST00000636400 NEFLP07196 543 aa10.02□□□□□ -0.81
TCF4-278ENST00000636400 TRIM26Q12899 539 aaPredicted RBP10□□□□□ -0.81
TCF4-278ENST00000636400 ERICH6Q7L0X2 663 aa9.99□□□□□ -0.81
TCF4-278ENST00000636400 ABCC9O60706 1549 aa9.94□□□□□ -0.82
TCF4-278ENST00000636400 MYT1Q01538 1121 aa9.92□□□□□ -0.82
TCF4-278ENST00000636400 SCRIBQ14160 1630 aa9.85□□□□□ -0.83
TCF4-278ENST00000636400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.82□□□□□ -0.84
TCF4-278ENST00000636400 HNRNPUL2Q1KMD3 747 aaKnown RBP9.82□□□□□ -0.84
TCF4-278ENST00000636400 ZCCHC6Q5VYS8 1495 aaKnown RBP9.81□□□□□ -0.84
TCF4-278ENST00000636400 RB1CC1Q8TDY2 1594 aa9.81□□□□□ -0.84
TCF4-278ENST00000636400 MYT1LQ9UL68 1186 aa9.79□□□□□ -0.84
TCF4-278ENST00000636400 CHIC1Q5VXU3 224 aa9.78□□□□□ -0.84
TCF4-278ENST00000636400 NACADO15069 1562 aa9.74□□□□□ -0.85
TCF4-278ENST00000636400 DAXXQ9UER7 740 aaPredicted RBP9.74□□□□□ -0.85
TCF4-278ENST00000636400 HRCP23327 699 aa9.7□□□□□ -0.86
TCF4-278ENST00000636400 ITGAEP38570 1179 aa9.68□□□□□ -0.86
TCF4-278ENST00000636400 YTHDC1Q96MU7 727 aaKnown RBP9.67□□□□□ -0.86
TCF4-278ENST00000636400 PPARGC1BQ86YN6 1023 aaKnown RBP9.65□□□□□ -0.87
TCF4-278ENST00000636400 PABPN1Q86U42 306 aaKnown RBP eCLIP9.63□□□□□ -0.87
TCF4-278ENST00000636400 LOC105371045A0A1W2PR82 267 aa9.62□□□□□ -0.87
TCF4-278ENST00000636400 FAM50AQ14320 339 aaKnown RBP9.6□□□□□ -0.87
TCF4-278ENST00000636400 POLR3GLQ9BT43 218 aa9.59□□□□□ -0.87
TCF4-278ENST00000636400 CDK11AQ9UQ88 783 aaPredicted RBP9.57□□□□□ -0.88
TCF4-278ENST00000636400 DCAF1Q9Y4B6 1507 aa9.55□□□□□ -0.88
TCF4-278ENST00000636400 DIEXFQ68CQ4 756 aaKnown RBP9.55□□□□□ -0.88
TCF4-278ENST00000636400 SLC4A1APQ9BWU0 796 aaKnown RBP9.53□□□□□ -0.88
TCF4-278ENST00000636400 TRIM52Q96A61 297 aa9.52□□□□□ -0.89
TCF4-278ENST00000636400 ACIN1Q9UKV3 1341 aaKnown RBP9.5□□□□□ -0.89
TCF4-278ENST00000636400 ZNF316A6NFI3 1004 aaPredicted RBP9.48□□□□□ -0.89
TCF4-278ENST00000636400 ANP32CO43423 234 aa9.48□□□□□ -0.89
TCF4-278ENST00000636400 BAZ1AQ9NRL2 1556 aaPredicted RBP9.47□□□□□ -0.89
TCF4-278ENST00000636400 EEA1Q15075 1411 aa9.47□□□□□ -0.89
TCF4-278ENST00000636400 CSRNP3Q8WYN3 585 aa9.47□□□□□ -0.89
TCF4-278ENST00000636400 CLSPNQ9HAW4 1339 aa9.46□□□□□ -0.9
TCF4-278ENST00000636400 FBLN2P98095 1184 aa9.45□□□□□ -0.9
TCF4-278ENST00000636400 NEFMP07197 916 aa9.45□□□□□ -0.9
TCF4-278ENST00000636400 RTL5Q5HYW3 569 aaPredicted RBP9.44□□□□□ -0.9
TCF4-278ENST00000636400 ZBTB47Q9UFB7 747 aaPredicted RBP9.43□□□□□ -0.9
TCF4-278ENST00000636400 BAZ1BQ9UIG0 1483 aaKnown RBP9.41□□□□□ -0.9
TCF4-278ENST00000636400 NEUROD1Q13562 356 aa9.4□□□□□ -0.91
TCF4-278ENST00000636400 ESF1Q9H501 851 aaKnown RBP9.35□□□□□ -0.91
TCF4-278ENST00000636400 TONSLQ96HA7 1378 aa9.35□□□□□ -0.91
TCF4-278ENST00000636400 GOLGA3Q08378 1498 aa9.35□□□□□ -0.91
TCF4-278ENST00000636400 SMARCA2P51531 1590 aa9.34□□□□□ -0.91
TCF4-278ENST00000636400 RSF1Q96T23 1441 aaPredicted RBP9.34□□□□□ -0.91
TCF4-278ENST00000636400 NPM1P06748 294 aaKnown RBP eCLIP9.33□□□□□ -0.92
TCF4-278ENST00000636400 ZNF326Q5BKZ1 582 aaKnown RBP9.33□□□□□ -0.92
TCF4-278ENST00000636400 MYO15BQ96JP2 1530 aa9.33□□□□□ -0.92
TCF4-278ENST00000636400 CNGB1Q14028 1251 aaPredicted RBP9.32□□□□□ -0.92
TCF4-278ENST00000636400 CANXP27824 592 aaKnown RBP9.31□□□□□ -0.92
TCF4-278ENST00000636400 CLIP1P30622 1438 aa9.3□□□□□ -0.92
TCF4-278ENST00000636400 MTUS2Q5JR59 1369 aa9.29□□□□□ -0.92
TCF4-278ENST00000636400 CEP164Q9UPV0 1460 aa9.29□□□□□ -0.92
TCF4-278ENST00000636400 KIF27Q86VH2 1401 aa9.29□□□□□ -0.92
TCF4-278ENST00000636400 BCANQ96GW7 911 aa9.29□□□□□ -0.92
TCF4-278ENST00000636400 ZNF777Q9ULD5 760 aaPredicted RBP9.26□□□□□ -0.93
TCF4-278ENST00000636400 WRNQ14191 1432 aaPredicted RBP eCLIP9.25□□□□□ -0.93
TCF4-278ENST00000636400 P3H3Q8IVL6 736 aa9.25□□□□□ -0.93
TCF4-278ENST00000636400 CHMP7Q8WUX9 453 aaPredicted RBP9.23□□□□□ -0.93
TCF4-278ENST00000636400 FHAD1B1AJZ9 1412 aa9.23□□□□□ -0.93
TCF4-278ENST00000636400 TSPY4P0CV99 314 aa9.23□□□□□ -0.93
TCF4-278ENST00000636400 TSPY10P0CW01 314 aa9.23□□□□□ -0.93
TCF4-278ENST00000636400 STAG3Q9UJ98 1225 aa9.23□□□□□ -0.93
TCF4-278ENST00000636400 ERCC6Q03468 1493 aa9.22□□□□□ -0.93
TCF4-278ENST00000636400 ANP32AP39687 249 aaKnown RBP9.22□□□□□ -0.93
TCF4-278ENST00000636400 UPF2Q9HAU5 1272 aaKnown RBP9.19□□□□□ -0.94
TCF4-278ENST00000636400 CEP162Q5TB80 1403 aa9.19□□□□□ -0.94
TCF4-278ENST00000636400 SLC24A1O60721 1099 aa9.19□□□□□ -0.94
TCF4-278ENST00000636400 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.17□□□□□ -0.94
TCF4-278ENST00000636400 WIZO95785 1651 aa9.16□□□□□ -0.94
TCF4-278ENST00000636400 TOP2AP11388 1531 aaKnown RBP9.16□□□□□ -0.94
TCF4-278ENST00000636400 GTF3C3Q9Y5Q9 886 aa9.16□□□□□ -0.94
TCF4-278ENST00000636400 SMARCA4P51532 1647 aa9.15□□□□□ -0.94
TCF4-278ENST00000636400 ARID3CA6NKF2 412 aa9.15□□□□□ -0.95
TCF4-278ENST00000636400 TNIKQ9UKE5 1360 aa9.14□□□□□ -0.95
TCF4-278ENST00000636400 ANP32BQ92688 251 aaKnown RBP9.14□□□□□ -0.95
TCF4-278ENST00000636400 CDCA8Q53HL2 280 aa9.12□□□□□ -0.95
TCF4-278ENST00000636400 TMC1Q8TDI8 760 aa9.12□□□□□ -0.95
TCF4-278ENST00000636400 PLEKHD1A6NEE1 506 aa9.11□□□□□ -0.95
TCF4-278ENST00000636400 EIF5BO60841 1220 aaKnown RBP9.1□□□□□ -0.95
TCF4-278ENST00000636400 WDR43Q15061 677 aaKnown RBP eCLIP9.1□□□□□ -0.95
TCF4-278ENST00000636400 HSP90AA1P07900 732 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms