RNA–Protein interactions for RNA: ENST00000358338.7

CACNA1E-202, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1E, Length 14,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-202ENST00000358338 NISCHQ9Y2I1 1504 aa11□□□□□ -0.65
CACNA1E-202ENST00000358338 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
CACNA1E-202ENST00000358338 MYT1Q01538 1121 aa10.86□□□□□ -0.67
CACNA1E-202ENST00000358338 PELP1Q8IZL8 1130 aaKnown RBP10.77□□□□□ -0.69
CACNA1E-202ENST00000358338 SUPT5HO00267 1087 aaKnown RBP10.61□□□□□ -0.71
CACNA1E-202ENST00000358338 APLP2Q06481 763 aa10.39□□□□□ -0.75
CACNA1E-202ENST00000358338 ZEB1P37275 1124 aaPredicted RBP10.38□□□□□ -0.75
CACNA1E-202ENST00000358338 SHROOM4Q9ULL8 1493 aa10.32□□□□□ -0.76
CACNA1E-202ENST00000358338 FAM9AQ8IZU1 332 aaPredicted RBP10.3□□□□□ -0.76
CACNA1E-202ENST00000358338 CENPBP07199 599 aaPredicted RBP10.23□□□□□ -0.77
CACNA1E-202ENST00000358338 CCER1Q8TC90 406 aaPredicted RBP10.19□□□□□ -0.78
CACNA1E-202ENST00000358338 PCGF6Q9BYE7 350 aa10.11□□□□□ -0.79
CACNA1E-202ENST00000358338 TRIM41Q8WV44 630 aa10.02□□□□□ -0.81
CACNA1E-202ENST00000358338 ERICH6Q7L0X2 663 aa9.97□□□□□ -0.81
CACNA1E-202ENST00000358338 TTBK1Q5TCY1 1321 aaPredicted RBP9.96□□□□□ -0.81
CACNA1E-202ENST00000358338 NEFLP07196 543 aa9.94□□□□□ -0.82
CACNA1E-202ENST00000358338 EHMT2Q96KQ7 1210 aa9.93□□□□□ -0.82
CACNA1E-202ENST00000358338 YTHDC1Q96MU7 727 aaKnown RBP9.91□□□□□ -0.82
CACNA1E-202ENST00000358338 TRIM26Q12899 539 aaPredicted RBP9.89□□□□□ -0.83
CACNA1E-202ENST00000358338 UBTFP17480 764 aaKnown RBP9.86□□□□□ -0.83
CACNA1E-202ENST00000358338 HRCP23327 699 aa9.78□□□□□ -0.84
CACNA1E-202ENST00000358338 DAXXQ9UER7 740 aaPredicted RBP9.68□□□□□ -0.86
CACNA1E-202ENST00000358338 ATP1B4Q9UN42 357 aaPredicted RBP9.66□□□□□ -0.86
CACNA1E-202ENST00000358338 CHIC1Q5VXU3 224 aa9.61□□□□□ -0.87
CACNA1E-202ENST00000358338 RANGAP1P46060 587 aaPredicted RBP9.61□□□□□ -0.87
CACNA1E-202ENST00000358338 CLSPNQ9HAW4 1339 aa9.51□□□□□ -0.89
CACNA1E-202ENST00000358338 MYT1LQ9UL68 1186 aa9.51□□□□□ -0.89
CACNA1E-202ENST00000358338 DIEXFQ68CQ4 756 aaKnown RBP9.48□□□□□ -0.89
CACNA1E-202ENST00000358338 RTL5Q5HYW3 569 aaPredicted RBP9.47□□□□□ -0.89
CACNA1E-202ENST00000358338 ZNF316A6NFI3 1004 aaPredicted RBP9.42□□□□□ -0.9
CACNA1E-202ENST00000358338 LOC105371045A0A1W2PR82 267 aa9.41□□□□□ -0.9
CACNA1E-202ENST00000358338 PPARGC1BQ86YN6 1023 aaKnown RBP9.38□□□□□ -0.91
CACNA1E-202ENST00000358338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.36□□□□□ -0.91
CACNA1E-202ENST00000358338 HNRNPUL2Q1KMD3 747 aaKnown RBP9.36□□□□□ -0.91
CACNA1E-202ENST00000358338 ANP32CO43423 234 aa9.35□□□□□ -0.91
CACNA1E-202ENST00000358338 ITGAEP38570 1179 aa9.35□□□□□ -0.91
CACNA1E-202ENST00000358338 CDK11AQ9UQ88 783 aaPredicted RBP9.29□□□□□ -0.92
CACNA1E-202ENST00000358338 POLR3GLQ9BT43 218 aa9.28□□□□□ -0.92
CACNA1E-202ENST00000358338 DCAF1Q9Y4B6 1507 aa9.27□□□□□ -0.93
CACNA1E-202ENST00000358338 FAM50AQ14320 339 aaKnown RBP9.26□□□□□ -0.93
CACNA1E-202ENST00000358338 ACIN1Q9UKV3 1341 aaKnown RBP9.26□□□□□ -0.93
CACNA1E-202ENST00000358338 GLIPR1L2Q4G1C9 344 aa9.25□□□□□ -0.93
CACNA1E-202ENST00000358338 ZBTB47Q9UFB7 747 aaPredicted RBP9.22□□□□□ -0.93
CACNA1E-202ENST00000358338 GTF3C3Q9Y5Q9 886 aa9.22□□□□□ -0.93
CACNA1E-202ENST00000358338 TRIM52Q96A61 297 aa9.21□□□□□ -0.94
CACNA1E-202ENST00000358338 ANP32AP39687 249 aaKnown RBP9.19□□□□□ -0.94
CACNA1E-202ENST00000358338 CSRNP3Q8WYN3 585 aa9.19□□□□□ -0.94
CACNA1E-202ENST00000358338 NEFMP07197 916 aa9.16□□□□□ -0.94
CACNA1E-202ENST00000358338 CCDC180Q9P1Z9 1646 aa9.16□□□□□ -0.94
CACNA1E-202ENST00000358338 NEUROD1Q13562 356 aa9.15□□□□□ -0.94
CACNA1E-202ENST00000358338 SLC4A1APQ9BWU0 796 aaKnown RBP9.14□□□□□ -0.95
CACNA1E-202ENST00000358338 ZCCHC6Q5VYS8 1495 aaKnown RBP9.14□□□□□ -0.95
CACNA1E-202ENST00000358338 ANP32BQ92688 251 aaKnown RBP9.12□□□□□ -0.95
CACNA1E-202ENST00000358338 CANXP27824 592 aaKnown RBP9.08□□□□□ -0.96
CACNA1E-202ENST00000358338 EEA1Q15075 1411 aa9.08□□□□□ -0.96
CACNA1E-202ENST00000358338 UPF2Q9HAU5 1272 aaKnown RBP9.07□□□□□ -0.96
CACNA1E-202ENST00000358338 TONSLQ96HA7 1378 aa9.05□□□□□ -0.96
CACNA1E-202ENST00000358338 ABCC9O60706 1549 aa9.05□□□□□ -0.96
CACNA1E-202ENST00000358338 PABPN1Q86U42 306 aaKnown RBP eCLIP9.03□□□□□ -0.96
CACNA1E-202ENST00000358338 BCANQ96GW7 911 aa9.02□□□□□ -0.97
CACNA1E-202ENST00000358338 ZNF326Q5BKZ1 582 aaKnown RBP9.02□□□□□ -0.97
CACNA1E-202ENST00000358338 ANP32EQ9BTT0 268 aa9.01□□□□□ -0.97
CACNA1E-202ENST00000358338 EIF5BO60841 1220 aaKnown RBP9.01□□□□□ -0.97
CACNA1E-202ENST00000358338 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.01□□□□□ -0.97
CACNA1E-202ENST00000358338 CNGB1Q14028 1251 aaPredicted RBP9.01□□□□□ -0.97
CACNA1E-202ENST00000358338 HSP90AA1P07900 732 aaKnown RBP8.98□□□□□ -0.97
CACNA1E-202ENST00000358338 SCRIBQ14160 1630 aa8.97□□□□□ -0.97
CACNA1E-202ENST00000358338 CLIP1P30622 1438 aa8.94□□□□□ -0.98
CACNA1E-202ENST00000358338 RSF1Q96T23 1441 aaPredicted RBP8.94□□□□□ -0.98
CACNA1E-202ENST00000358338 CCDC136Q96JN2 1154 aa8.92□□□□□ -0.98
CACNA1E-202ENST00000358338 HNRNPUQ00839 825 aaKnown RBP eCLIP8.92□□□□□ -0.98
CACNA1E-202ENST00000358338 TMC1Q8TDI8 760 aa8.92□□□□□ -0.98
CACNA1E-202ENST00000358338 FKBP8Q14318 412 aa8.91□□□□□ -0.98
CACNA1E-202ENST00000358338 DDRGK1Q96HY6 314 aa8.91□□□□□ -0.98
CACNA1E-202ENST00000358338 SLC24A1O60721 1099 aa8.91□□□□□ -0.98
CACNA1E-202ENST00000358338 FBLN2P98095 1184 aa8.91□□□□□ -0.98
CACNA1E-202ENST00000358338 GOLGA3Q08378 1498 aa8.91□□□□□ -0.98
CACNA1E-202ENST00000358338 CDCA8Q53HL2 280 aa8.89□□□□□ -0.99
CACNA1E-202ENST00000358338 BECN1Q14457 450 aa8.89□□□□□ -0.99
CACNA1E-202ENST00000358338 TIMELESSQ9UNS1 1208 aa8.88□□□□□ -0.99
CACNA1E-202ENST00000358338 TNNT2P45379 298 aaPredicted RBP8.88□□□□□ -0.99
CACNA1E-202ENST00000358338 MTUS2Q5JR59 1369 aa8.88□□□□□ -0.99
CACNA1E-202ENST00000358338 TNIKQ9UKE5 1360 aa8.87□□□□□ -0.99
CACNA1E-202ENST00000358338 NACADO15069 1562 aa8.87□□□□□ -0.99
CACNA1E-202ENST00000358338 MYH16Q9H6N6 1097 aa8.87□□□□□ -0.99
CACNA1E-202ENST00000358338 MRS2Q9HD23 443 aa8.87□□□□□ -0.99
CACNA1E-202ENST00000358338 ESF1Q9H501 851 aaKnown RBP8.86□□□□□ -0.99
CACNA1E-202ENST00000358338 RB1CC1Q8TDY2 1594 aa8.86□□□□□ -0.99
CACNA1E-202ENST00000358338 TSPY4P0CV99 314 aa8.86□□□□□ -0.99
CACNA1E-202ENST00000358338 TSPY10P0CW01 314 aa8.86□□□□□ -0.99
CACNA1E-202ENST00000358338 WDR43Q15061 677 aaKnown RBP eCLIP8.86□□□□□ -0.99
CACNA1E-202ENST00000358338 DDX10Q13206 875 aaKnown RBP8.86□□□□□ -0.99
CACNA1E-202ENST00000358338 ZNF777Q9ULD5 760 aaPredicted RBP8.86□□□□□ -0.99
CACNA1E-202ENST00000358338 EIF4G2P78344 907 aaKnown RBP eCLIP8.85□□□□□ -0.99
CACNA1E-202ENST00000358338 NCLP19338 710 aaKnown RBP8.85□□□□□ -0.99
CACNA1E-202ENST00000358338 ERICH6BQ5W0A0 696 aa8.85□□□□□ -0.99
CACNA1E-202ENST00000358338 P3H3Q8IVL6 736 aa8.84□□□□□ -0.99
CACNA1E-202ENST00000358338 CEP164Q9UPV0 1460 aa8.84□□□□□ -0.99
CACNA1E-202ENST00000358338 GOLGA6L22H0YM25 854 aa8.84□□□□□ -0.99
CACNA1E-202ENST00000358338 CHMP4BQ9H444 224 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms