RNA–Protein interactions for RNA: ENST00000286067.4

LCOR-201, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

BASIC

Gene LCOR, Length 4,542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-201ENST00000286067 NISCHQ9Y2I1 1504 aa12.07□□□□□ -0.48
LCOR-201ENST00000286067 MYT1Q01538 1121 aa11.76□□□□□ -0.53
LCOR-201ENST00000286067 DCAF8L2P0C7V8 631 aa11.59□□□□□ -0.55
LCOR-201ENST00000286067 PELP1Q8IZL8 1130 aaKnown RBP11.2□□□□□ -0.62
LCOR-201ENST00000286067 SUPT5HO00267 1087 aaKnown RBP11.03□□□□□ -0.64
LCOR-201ENST00000286067 TTBK1Q5TCY1 1321 aaPredicted RBP10.95□□□□□ -0.66
LCOR-201ENST00000286067 RANGAP1P46060 587 aaPredicted RBP10.85□□□□□ -0.67
LCOR-201ENST00000286067 SHROOM4Q9ULL8 1493 aa10.84□□□□□ -0.67
LCOR-201ENST00000286067 ERICH6Q7L0X2 663 aa10.8□□□□□ -0.68
LCOR-201ENST00000286067 YTHDC1Q96MU7 727 aaKnown RBP10.64□□□□□ -0.71
LCOR-201ENST00000286067 EHMT2Q96KQ7 1210 aa10.5□□□□□ -0.73
LCOR-201ENST00000286067 CCDC180Q9P1Z9 1646 aa10.48□□□□□ -0.73
LCOR-201ENST00000286067 APLP2Q06481 763 aa10.46□□□□□ -0.73
LCOR-201ENST00000286067 SLC24A1O60721 1099 aa10.37□□□□□ -0.75
LCOR-201ENST00000286067 FAM9AQ8IZU1 332 aaPredicted RBP10.36□□□□□ -0.75
LCOR-201ENST00000286067 CCER1Q8TC90 406 aaPredicted RBP10.34□□□□□ -0.75
LCOR-201ENST00000286067 TRIM41Q8WV44 630 aa10.28□□□□□ -0.76
LCOR-201ENST00000286067 PCGF6Q9BYE7 350 aa10.25□□□□□ -0.77
LCOR-201ENST00000286067 ZEB1P37275 1124 aaPredicted RBP10.16□□□□□ -0.78
LCOR-201ENST00000286067 ZCCHC6Q5VYS8 1495 aaKnown RBP10.12□□□□□ -0.79
LCOR-201ENST00000286067 UBTFP17480 764 aaKnown RBP10.12□□□□□ -0.79
LCOR-201ENST00000286067 POLR3GLQ9BT43 218 aa10.05□□□□□ -0.8
LCOR-201ENST00000286067 ATP1B4Q9UN42 357 aaPredicted RBP10.03□□□□□ -0.8
LCOR-201ENST00000286067 CENPBP07199 599 aaPredicted RBP10.01□□□□□ -0.81
LCOR-201ENST00000286067 GLIPR1L2Q4G1C9 344 aa9.99□□□□□ -0.81
LCOR-201ENST00000286067 MYT1LQ9UL68 1186 aa9.97□□□□□ -0.81
LCOR-201ENST00000286067 DCAF1Q9Y4B6 1507 aa9.97□□□□□ -0.81
LCOR-201ENST00000286067 TRIM26Q12899 539 aaPredicted RBP9.92□□□□□ -0.82
LCOR-201ENST00000286067 CHIC1Q5VXU3 224 aa9.91□□□□□ -0.82
LCOR-201ENST00000286067 ABCC9O60706 1549 aa9.91□□□□□ -0.82
LCOR-201ENST00000286067 PPARGC1BQ86YN6 1023 aaKnown RBP9.83□□□□□ -0.84
LCOR-201ENST00000286067 NACADO15069 1562 aa9.83□□□□□ -0.84
LCOR-201ENST00000286067 MYO15BQ96JP2 1530 aa9.83□□□□□ -0.84
LCOR-201ENST00000286067 LOC105371045A0A1W2PR82 267 aa9.81□□□□□ -0.84
LCOR-201ENST00000286067 NEFLP07196 543 aa9.78□□□□□ -0.84
LCOR-201ENST00000286067 RB1CC1Q8TDY2 1594 aa9.76□□□□□ -0.85
LCOR-201ENST00000286067 HRCP23327 699 aa9.76□□□□□ -0.85
LCOR-201ENST00000286067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.72□□□□□ -0.85
LCOR-201ENST00000286067 HNRNPUL2Q1KMD3 747 aaKnown RBP9.72□□□□□ -0.85
LCOR-201ENST00000286067 ITGAEP38570 1179 aa9.71□□□□□ -0.85
LCOR-201ENST00000286067 RTL5Q5HYW3 569 aaPredicted RBP9.69□□□□□ -0.86
LCOR-201ENST00000286067 SCRIBQ14160 1630 aa9.69□□□□□ -0.86
LCOR-201ENST00000286067 PABPN1Q86U42 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
LCOR-201ENST00000286067 CLSPNQ9HAW4 1339 aa9.66□□□□□ -0.86
LCOR-201ENST00000286067 HMGB1P09429 215 aaKnown RBP9.6□□□□□ -0.87
LCOR-201ENST00000286067 DAXXQ9UER7 740 aaPredicted RBP9.55□□□□□ -0.88
LCOR-201ENST00000286067 AMER1Q5JTC6 1135 aaPredicted RBP9.54□□□□□ -0.88
LCOR-201ENST00000286067 FAM50AQ14320 339 aaKnown RBP9.52□□□□□ -0.89
LCOR-201ENST00000286067 DIEXFQ68CQ4 756 aaKnown RBP9.49□□□□□ -0.89
LCOR-201ENST00000286067 EIF5BO60841 1220 aaKnown RBP9.49□□□□□ -0.89
LCOR-201ENST00000286067 ZNF326Q5BKZ1 582 aaKnown RBP9.48□□□□□ -0.89
LCOR-201ENST00000286067 CSRNP3Q8WYN3 585 aa9.48□□□□□ -0.89
LCOR-201ENST00000286067 NCLP19338 710 aaKnown RBP9.45□□□□□ -0.9
LCOR-201ENST00000286067 TRIM52Q96A61 297 aa9.45□□□□□ -0.9
LCOR-201ENST00000286067 HOMEZQ8IX15 550 aa9.42□□□□□ -0.9
LCOR-201ENST00000286067 CNGB1Q14028 1251 aaPredicted RBP9.41□□□□□ -0.9
LCOR-201ENST00000286067 BAZ1AQ9NRL2 1556 aaPredicted RBP9.41□□□□□ -0.9
LCOR-201ENST00000286067 RSF1Q96T23 1441 aaPredicted RBP9.4□□□□□ -0.9
LCOR-201ENST00000286067 NEUROD1Q13562 356 aa9.39□□□□□ -0.91
LCOR-201ENST00000286067 FBLN2P98095 1184 aa9.38□□□□□ -0.91
LCOR-201ENST00000286067 PTMSP20962 102 aa9.37□□□□□ -0.91
LCOR-201ENST00000286067 SLC4A1APQ9BWU0 796 aaKnown RBP9.36□□□□□ -0.91
LCOR-201ENST00000286067 ANP32CO43423 234 aa9.33□□□□□ -0.92
LCOR-201ENST00000286067 CDK11BP21127 795 aaKnown RBP9.33□□□□□ -0.92
LCOR-201ENST00000286067 CDK11AQ9UQ88 783 aaPredicted RBP9.33□□□□□ -0.92
LCOR-201ENST00000286067 ZNF316A6NFI3 1004 aaPredicted RBP9.32□□□□□ -0.92
LCOR-201ENST00000286067 TNNT2P45379 298 aaPredicted RBP9.32□□□□□ -0.92
LCOR-201ENST00000286067 P3H3Q8IVL6 736 aa9.32□□□□□ -0.92
LCOR-201ENST00000286067 HAP1P54257 671 aaPredicted RBP9.3□□□□□ -0.92
LCOR-201ENST00000286067 CECR2Q9BXF3 1484 aa9.28□□□□□ -0.92
LCOR-201ENST00000286067 MROH2BQ7Z745 1585 aa9.26□□□□□ -0.93
LCOR-201ENST00000286067 BCANQ96GW7 911 aa9.25□□□□□ -0.93
LCOR-201ENST00000286067 C14orf37Q86TY3 774 aa9.24□□□□□ -0.93
LCOR-201ENST00000286067 SMARCA4P51532 1647 aa9.24□□□□□ -0.93
LCOR-201ENST00000286067 TRIM44Q96DX7 344 aaPredicted RBP9.23□□□□□ -0.93
LCOR-201ENST00000286067 ARID3CA6NKF2 412 aa9.23□□□□□ -0.93
LCOR-201ENST00000286067 SMARCA2P51531 1590 aa9.23□□□□□ -0.93
LCOR-201ENST00000286067 ZNF777Q9ULD5 760 aaPredicted RBP9.21□□□□□ -0.93
LCOR-201ENST00000286067 TOP2AP11388 1531 aaKnown RBP9.21□□□□□ -0.93
LCOR-201ENST00000286067 GTF3C3Q9Y5Q9 886 aa9.21□□□□□ -0.94
LCOR-201ENST00000286067 BAZ1BQ9UIG0 1483 aaKnown RBP9.2□□□□□ -0.94
LCOR-201ENST00000286067 TONSLQ96HA7 1378 aa9.18□□□□□ -0.94
LCOR-201ENST00000286067 WIZO95785 1651 aa9.17□□□□□ -0.94
LCOR-201ENST00000286067 EEA1Q15075 1411 aa9.17□□□□□ -0.94
LCOR-201ENST00000286067 UNC13AQ9UPW8 1703 aa9.16□□□□□ -0.94
LCOR-201ENST00000286067 CALRP27797 417 aaKnown RBP9.16□□□□□ -0.94
LCOR-201ENST00000286067 ARXQ96QS3 562 aa9.16□□□□□ -0.94
LCOR-201ENST00000286067 NEFMP07197 916 aa9.15□□□□□ -0.95
LCOR-201ENST00000286067 ACIN1Q9UKV3 1341 aaKnown RBP9.14□□□□□ -0.95
LCOR-201ENST00000286067 ZBTB47Q9UFB7 747 aaPredicted RBP9.13□□□□□ -0.95
LCOR-201ENST00000286067 CLIP1P30622 1438 aa9.13□□□□□ -0.95
LCOR-201ENST00000286067 BICRAQ9NZM4 1560 aa9.13□□□□□ -0.95
LCOR-201ENST00000286067 NPM1P06748 294 aaKnown RBP eCLIP9.13□□□□□ -0.95
LCOR-201ENST00000286067 NBR1Q14596 966 aa9.12□□□□□ -0.95
LCOR-201ENST00000286067 LAS1LQ9Y4W2 734 aaKnown RBP9.12□□□□□ -0.95
LCOR-201ENST00000286067 MTUS2Q5JR59 1369 aa9.11□□□□□ -0.95
LCOR-201ENST00000286067 PODXL2Q9NZ53 605 aa9.11□□□□□ -0.95
LCOR-201ENST00000286067 TSPY4P0CV99 314 aa9.1□□□□□ -0.95
LCOR-201ENST00000286067 TSPY10P0CW01 314 aa9.1□□□□□ -0.95
LCOR-201ENST00000286067 CANXP27824 592 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms