Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SLFN12-206ENST00000452764 2423 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
LRCH3Q96II8 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.89□□□□□ -0.99
LRCH3Q96II8 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 PPARG-207ENST00000397015 1722 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC008895.1-201ENST00000624074 2622 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 TBX5-201ENST00000310346 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 DPY19L1P1-201ENST00000417811 2594 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 MAPK10-312ENST00000641391 2488 ntAPPRIS P2 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 MAPK10-378ENST00000642009 2463 ntAPPRIS P2 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 AL451074.2-201ENST00000423121 2150 ntTSL 2 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 ABRAXAS1-206ENST00000506553 1869 ntTSL 5 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 AL669831.5-218ENST00000591702 1873 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 Y_RNA.296-201ENST00000364930 108 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 RPS27-202ENST00000392558 625 ntTSL 2 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC104297.1-201ENST00000393779 870 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC004986.1-201ENST00000414855 607 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 GTF2IP23-201ENST00000423746 351 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 RPS10P14-201ENST00000440748 502 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 Z98949.2-201ENST00000440996 144 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC239860.1-201ENST00000444680 1270 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 GAPDHP50-201ENST00000464421 993 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC107385.1-201ENST00000507985 778 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 MTCO1P30-201ENST00000515244 580 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC024405.1-201ENST00000532521 1042 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 CYP2C60P-201ENST00000566088 139 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC010653.1-201ENST00000571108 881 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC024614.1-201ENST00000577546 307 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC019193.3-201ENST00000609144 554 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC027807.2-201ENST00000616099 408 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC040978.1-201ENST00000617244 1282 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC005858.4-201ENST00000623191 700 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 AC022743.1-201ENST00000624990 664 ntBASIC8.88□□□□□ -0.99
LRCH3Q96II8 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 ZNF665-201ENST00000396424 4159 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 FAM13C-217ENST00000618804 3333 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC8.88□□□□□ -0.99
LRCH3Q96II8 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LRCH3Q96II8 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LRCH3Q96II8 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LRCH3Q96II8 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LRCH3Q96II8 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LRCH3Q96II8 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LRCH3Q96II8 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LRCH3Q96II8 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
LRCH3Q96II8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LRCH3Q96II8 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms