Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
POLR3DP05423 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.33□□□□□ -1.08
POLR3DP05423 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
POLR3DP05423 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.33□□□□□ -1.08
POLR3DP05423 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
POLR3DP05423 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
POLR3DP05423 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.33□□□□□ -1.08
POLR3DP05423 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
POLR3DP05423 AL359263.1-201ENST00000441188 2796 ntBASIC8.33□□□□□ -1.08
POLR3DP05423 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
POLR3DP05423 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
POLR3DP05423 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
POLR3DP05423 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
POLR3DP05423 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
POLR3DP05423 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC8.32□□□□□ -1.08
POLR3DP05423 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
POLR3DP05423 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
POLR3DP05423 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
POLR3DP05423 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
POLR3DP05423 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.32□□□□□ -1.08
POLR3DP05423 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
POLR3DP05423 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
POLR3DP05423 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
POLR3DP05423 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
POLR3DP05423 RAD1P1-201ENST00000231383 813 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
POLR3DP05423 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
POLR3DP05423 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
POLR3DP05423 TPT1-204ENST00000379060 764 ntTSL 5 BASIC8.32□□□□□ -1.08
POLR3DP05423 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC8.32□□□□□ -1.08
POLR3DP05423 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
POLR3DP05423 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
POLR3DP05423 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
POLR3DP05423 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC8.32□□□□□ -1.08
POLR3DP05423 RNU6-648P-201ENST00000410190 107 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.32□□□□□ -1.08
POLR3DP05423 OSTCP5-201ENST00000425293 453 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC8.32□□□□□ -1.08
POLR3DP05423 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC8.32□□□□□ -1.08
POLR3DP05423 AC073072.2-201ENST00000447425 348 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 GOT2P2-201ENST00000450663 1251 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 RPL34P34-201ENST00000465389 354 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC8.32□□□□□ -1.08
POLR3DP05423 RPL21P18-201ENST00000469899 480 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 PPP1R2P6-201ENST00000478565 588 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 RN7SL350P-201ENST00000492591 299 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 SNX18P25-201ENST00000510539 758 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC8.32□□□□□ -1.08
POLR3DP05423 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.32□□□□□ -1.08
POLR3DP05423 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC8.32□□□□□ -1.08
POLR3DP05423 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
POLR3DP05423 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC8.32□□□□□ -1.08
POLR3DP05423 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC8.32□□□□□ -1.08
POLR3DP05423 CHEK2P2-201ENST00000554701 672 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC8.32□□□□□ -1.08
POLR3DP05423 NBR2-204ENST00000587322 63 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.32□□□□□ -1.08
POLR3DP05423 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC8.32□□□□□ -1.08
POLR3DP05423 RDM1-219ENST00000615378 542 ntTSL 3 BASIC8.32□□□□□ -1.08
POLR3DP05423 AC244100.4-201ENST00000617747 388 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 MRPL57P3-201ENST00000619218 176 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC8.32□□□□□ -1.08
POLR3DP05423 MBD5-221ENST00000637159 902 ntTSL 5 BASIC8.32□□□□□ -1.08
POLR3DP05423 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
POLR3DP05423 CASC19-212ENST00000641153 1287 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
POLR3DP05423 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
POLR3DP05423 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.32□□□□□ -1.08
POLR3DP05423 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
POLR3DP05423 CDY7P-201ENST00000429883 1604 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
POLR3DP05423 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
POLR3DP05423 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.32□□□□□ -1.08
POLR3DP05423 AC004023.1-201ENST00000561473 1744 ntBASIC8.32□□□□□ -1.08
POLR3DP05423 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.31□□□□□ -1.08
POLR3DP05423 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
POLR3DP05423 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
POLR3DP05423 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
POLR3DP05423 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
POLR3DP05423 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
POLR3DP05423 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
POLR3DP05423 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC8.31□□□□□ -1.08
POLR3DP05423 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
POLR3DP05423 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.31□□□□□ -1.08
POLR3DP05423 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
POLR3DP05423 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
POLR3DP05423 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC8.31□□□□□ -1.08
POLR3DP05423 RNA5SP152-201ENST00000365184 110 ntBASIC8.31□□□□□ -1.08
POLR3DP05423 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
POLR3DP05423 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC8.31□□□□□ -1.08
POLR3DP05423 AL445238.1-204ENST00000400311 463 ntBASIC8.31□□□□□ -1.08
POLR3DP05423 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
POLR3DP05423 SNORA79B-201ENST00000410557 148 ntBASIC8.31□□□□□ -1.08
POLR3DP05423 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC8.31□□□□□ -1.08
POLR3DP05423 RPL17P17-201ENST00000419491 557 ntBASIC8.31□□□□□ -1.08
POLR3DP05423 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.31□□□□□ -1.08
POLR3DP05423 MTCO1P45-201ENST00000431457 267 ntBASIC8.31□□□□□ -1.08
POLR3DP05423 BX119917.1-201ENST00000432517 502 ntBASIC8.31□□□□□ -1.08
POLR3DP05423 LSM3P3-201ENST00000436601 306 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms