RNA–Protein interactions for RNA: ENST00000561473.1

AC004023.1-201, humanhuman

BASIC

Gene AC004023.1, Length 1,744 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004023.1-201ENST00000561473 AEBP2Q6ZN18 517 aaPredicted RBP26.49■■□□□ 1.83
AC004023.1-201ENST00000561473 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
AC004023.1-201ENST00000561473 SENP3Q9H4L4 574 aaPredicted RBP22.77■■□□□ 1.23
AC004023.1-201ENST00000561473 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
AC004023.1-201ENST00000561473 FOXD1Q16676 465 aa21.22■□□□□ 0.99
AC004023.1-201ENST00000561473 POTEDQ86YR6 584 aa20.38■□□□□ 0.85
AC004023.1-201ENST00000561473 MSH5O43196 834 aa20.11■□□□□ 0.81
AC004023.1-201ENST00000561473 PIAS4Q8N2W9 510 aaPredicted RBP19.74■□□□□ 0.75
AC004023.1-201ENST00000561473 PLPPR3Q6T4P5 718 aa19.65■□□□□ 0.74
AC004023.1-201ENST00000561473 PPP6R1Q9UPN7 881 aa19.44■□□□□ 0.7
AC004023.1-201ENST00000561473 ADRA2BP18089 450 aa19.37■□□□□ 0.69
AC004023.1-201ENST00000561473 DMRT2Q9Y5R5 561 aa17.96■□□□□ 0.47
AC004023.1-201ENST00000561473 MAPK8IP2Q13387 824 aaPredicted RBP17.92■□□□□ 0.46
AC004023.1-201ENST00000561473 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
AC004023.1-201ENST00000561473 CACNB1Q02641 598 aaPredicted RBP17.54■□□□□ 0.4
AC004023.1-201ENST00000561473 DCAF8L1A6NGE4 600 aa17.27■□□□□ 0.35
AC004023.1-201ENST00000561473 PPP4R3CPQ6ZMV5 832 aa17.18■□□□□ 0.34
AC004023.1-201ENST00000561473 HOXD11P31277 338 aaPredicted RBP17.11■□□□□ 0.33
AC004023.1-201ENST00000561473 RNF39Q9H2S5 420 aa17.07■□□□□ 0.32
AC004023.1-201ENST00000561473 CNKSR2Q8WXI2 1034 aa16.91■□□□□ 0.3
AC004023.1-201ENST00000561473 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
AC004023.1-201ENST00000561473 NISCHQ9Y2I1 1504 aa16.85■□□□□ 0.29
AC004023.1-201ENST00000561473 C1QBPQ07021 282 aaKnown RBP16.84■□□□□ 0.29
AC004023.1-201ENST00000561473 NCBP3Q53F19 620 aaKnown RBP16.67■□□□□ 0.26
AC004023.1-201ENST00000561473 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
AC004023.1-201ENST00000561473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.33■□□□□ 0.2
AC004023.1-201ENST00000561473 NPM3O75607 178 aaKnown RBP16.32■□□□□ 0.2
AC004023.1-201ENST00000561473 KCNA4P22459 653 aa16.11■□□□□ 0.17
AC004023.1-201ENST00000561473 POTEHQ6S545 545 aa15.9■□□□□ 0.14
AC004023.1-201ENST00000561473 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
AC004023.1-201ENST00000561473 CAPN15O75808 1086 aa15.84■□□□□ 0.13
AC004023.1-201ENST00000561473 DSG3P32926 999 aa15.82■□□□□ 0.12
AC004023.1-201ENST00000561473 SPINK5Q9NQ38 1064 aaPredicted RBP15.78■□□□□ 0.12
AC004023.1-201ENST00000561473 SLC4A2P04920 1241 aa15.52■□□□□ 0.08
AC004023.1-201ENST00000561473 APLP2Q06481 763 aa15.52■□□□□ 0.08
AC004023.1-201ENST00000561473 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.06
AC004023.1-201ENST00000561473 ZNF219Q9P2Y4 722 aaPredicted RBP15.44■□□□□ 0.06
AC004023.1-201ENST00000561473 ABCB7O75027 752 aa15.4■□□□□ 0.06
AC004023.1-201ENST00000561473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.36■□□□□ 0.05
AC004023.1-201ENST00000561473 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
AC004023.1-201ENST00000561473 SLC4A1APQ9BWU0 796 aaKnown RBP15.29■□□□□ 0.04
AC004023.1-201ENST00000561473 ABCC9O60706 1549 aa15.28■□□□□ 0.04
AC004023.1-201ENST00000561473 SAMD1Q6SPF0 538 aaPredicted RBP15.24■□□□□ 0.03
AC004023.1-201ENST00000561473 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
AC004023.1-201ENST00000561473 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
AC004023.1-201ENST00000561473 FOXD4L1Q9NU39 408 aa15.07■□□□□ 0
AC004023.1-201ENST00000561473 CCDC180Q9P1Z9 1646 aa15.04■□□□□ -0
AC004023.1-201ENST00000561473 CHRDL2Q6WN34 429 aa14.98□□□□□ -0.01
AC004023.1-201ENST00000561473 POLA2Q14181 598 aa14.92□□□□□ -0.02
AC004023.1-201ENST00000561473 ZBTB22O15209 634 aa14.78□□□□□ -0.04
AC004023.1-201ENST00000561473 AKT1S1Q96B36 256 aa14.71□□□□□ -0.05
AC004023.1-201ENST00000561473 ATXN8OSP0DMR3 200 aa14.69□□□□□ -0.06
AC004023.1-201ENST00000561473 SP7Q8TDD2 431 aaPredicted RBP14.69□□□□□ -0.06
AC004023.1-201ENST00000561473 ATF5Q9Y2D1 282 aaPredicted RBP14.65□□□□□ -0.06
AC004023.1-201ENST00000561473 ZBTB12Q9Y330 459 aaPredicted RBP14.65□□□□□ -0.06
AC004023.1-201ENST00000561473 DCAF8L2P0C7V8 631 aa14.55□□□□□ -0.08
AC004023.1-201ENST00000561473 REM2Q8IYK8 340 aaPredicted RBP14.54□□□□□ -0.08
AC004023.1-201ENST00000561473 PIP4P2Q8N4L2 257 aa14.52□□□□□ -0.09
AC004023.1-201ENST00000561473 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
AC004023.1-201ENST00000561473 RB1CC1Q8TDY2 1594 aa14.43□□□□□ -0.1
AC004023.1-201ENST00000561473 HAX1O00165 279 aa14.41□□□□□ -0.1
AC004023.1-201ENST00000561473 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
AC004023.1-201ENST00000561473 FXR2P51116 673 aaKnown RBP eCLIP14.36□□□□□ -0.11
AC004023.1-201ENST00000561473 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
AC004023.1-201ENST00000561473 CSRNP3Q8WYN3 585 aa14.29□□□□□ -0.12
AC004023.1-201ENST00000561473 NACADO15069 1562 aa14.29□□□□□ -0.12
AC004023.1-201ENST00000561473 FBLN2P98095 1184 aa14.22□□□□□ -0.13
AC004023.1-201ENST00000561473 SPDYE2BA6NHP3 402 aa14.13□□□□□ -0.15
AC004023.1-201ENST00000561473 SPDYE6P0CI01 402 aa14.13□□□□□ -0.15
AC004023.1-201ENST00000561473 SPDYE2Q495Y8 402 aa14.13□□□□□ -0.15
AC004023.1-201ENST00000561473 EHMT2Q96KQ7 1210 aa14.12□□□□□ -0.15
AC004023.1-201ENST00000561473 EVX2Q03828 476 aa14.12□□□□□ -0.15
AC004023.1-201ENST00000561473 UNC13AQ9UPW8 1703 aa14.03□□□□□ -0.16
AC004023.1-201ENST00000561473 MKRN4PQ13434 485 aaPredicted RBP14.03□□□□□ -0.16
AC004023.1-201ENST00000561473 PRKAR2AP13861 404 aaKnown RBP14.02□□□□□ -0.16
AC004023.1-201ENST00000561473 SPDYE1Q8NFV5 336 aaPredicted RBP14.01□□□□□ -0.17
AC004023.1-201ENST00000561473 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
AC004023.1-201ENST00000561473 CLEC11AQ9Y240 323 aa13.98□□□□□ -0.17
AC004023.1-201ENST00000561473 BICRAQ9NZM4 1560 aa13.96□□□□□ -0.17
AC004023.1-201ENST00000561473 C19orf67A6NJJ6 358 aa13.93□□□□□ -0.18
AC004023.1-201ENST00000561473 ZCCHC6Q5VYS8 1495 aaKnown RBP13.91□□□□□ -0.18
AC004023.1-201ENST00000561473 SSUH2Q9Y2M2 353 aa13.89□□□□□ -0.19
AC004023.1-201ENST00000561473 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
AC004023.1-201ENST00000561473 SCRIBQ14160 1630 aa13.85□□□□□ -0.19
AC004023.1-201ENST00000561473 GABBR2O75899 941 aa13.83□□□□□ -0.2
AC004023.1-201ENST00000561473 DCAF1Q9Y4B6 1507 aa13.82□□□□□ -0.2
AC004023.1-201ENST00000561473 LHX8Q68G74 356 aa13.77□□□□□ -0.21
AC004023.1-201ENST00000561473 CECR2Q9BXF3 1484 aa13.74□□□□□ -0.21
AC004023.1-201ENST00000561473 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
AC004023.1-201ENST00000561473 CC2D2AQ9P2K1 1620 aa13.72□□□□□ -0.21
AC004023.1-201ENST00000561473 SHROOM4Q9ULL8 1493 aa13.71□□□□□ -0.21
AC004023.1-201ENST00000561473 PRR29P0C7W0 189 aa13.7□□□□□ -0.22
AC004023.1-201ENST00000561473 EIF4G1Q04637 1599 aaKnown RBP13.66□□□□□ -0.22
AC004023.1-201ENST00000561473 CD44P16070 742 aaKnown RBP13.55□□□□□ -0.24
AC004023.1-201ENST00000561473 CLCN6P51797 869 aa13.53□□□□□ -0.24
AC004023.1-201ENST00000561473 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
AC004023.1-201ENST00000561473 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
AC004023.1-201ENST00000561473 POTEIP0CG38 1075 aa13.5□□□□□ -0.25
AC004023.1-201ENST00000561473 STAG3Q9UJ98 1225 aa13.45□□□□□ -0.26
AC004023.1-201ENST00000561473 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms