RNA–Protein interactions for RNA: ENST00000551075.1

AC090049.1-201, humanhuman

TSL 3 BASIC

Gene AC090049.1, Length 1,011 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090049.1-201ENST00000551075 AEBP2Q6ZN18 517 aaPredicted RBP31.5■■■□□ 2.63
AC090049.1-201ENST00000551075 CHIC1Q5VXU3 224 aa29.86■■■□□ 2.37
AC090049.1-201ENST00000551075 SENP3Q9H4L4 574 aaPredicted RBP26.9■■□□□ 1.9
AC090049.1-201ENST00000551075 PHF23Q9BUL5 403 aaPredicted RBP26.51■■□□□ 1.83
AC090049.1-201ENST00000551075 FOXD1Q16676 465 aa25.07■■□□□ 1.6
AC090049.1-201ENST00000551075 PLPPR3Q6T4P5 718 aa23.81■■□□□ 1.4
AC090049.1-201ENST00000551075 MSH5O43196 834 aa23.51■■□□□ 1.35
AC090049.1-201ENST00000551075 PIAS4Q8N2W9 510 aaPredicted RBP23.37■■□□□ 1.33
AC090049.1-201ENST00000551075 PPP6R1Q9UPN7 881 aa23.36■■□□□ 1.33
AC090049.1-201ENST00000551075 ADRA2BP18089 450 aa23.26■■□□□ 1.31
AC090049.1-201ENST00000551075 POTEDQ86YR6 584 aa23.05■■□□□ 1.28
AC090049.1-201ENST00000551075 MAPK8IP2Q13387 824 aaPredicted RBP21.37■■□□□ 1.01
AC090049.1-201ENST00000551075 DMRT2Q9Y5R5 561 aa21.33■■□□□ 1.01
AC090049.1-201ENST00000551075 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
AC090049.1-201ENST00000551075 PPP4R3CPQ6ZMV5 832 aa20.84■□□□□ 0.93
AC090049.1-201ENST00000551075 HOXD11P31277 338 aaPredicted RBP20.54■□□□□ 0.88
AC090049.1-201ENST00000551075 CNKSR2Q8WXI2 1034 aa20.49■□□□□ 0.87
AC090049.1-201ENST00000551075 RNF216Q9NWF9 866 aaPredicted RBP20.35■□□□□ 0.85
AC090049.1-201ENST00000551075 DCAF8L1A6NGE4 600 aa20.33■□□□□ 0.85
AC090049.1-201ENST00000551075 CACNB1Q02641 598 aaPredicted RBP20.15■□□□□ 0.82
AC090049.1-201ENST00000551075 RNF39Q9H2S5 420 aa20.06■□□□□ 0.8
AC090049.1-201ENST00000551075 NCBP3Q53F19 620 aaKnown RBP20.02■□□□□ 0.8
AC090049.1-201ENST00000551075 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
AC090049.1-201ENST00000551075 C1QBPQ07021 282 aaKnown RBP19.76■□□□□ 0.75
AC090049.1-201ENST00000551075 NPM3O75607 178 aaKnown RBP19.73■□□□□ 0.75
AC090049.1-201ENST00000551075 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.47■□□□□ 0.71
AC090049.1-201ENST00000551075 KCNA4P22459 653 aa19.27■□□□□ 0.68
AC090049.1-201ENST00000551075 U3KPZ7 1027 aaPredicted RBP19.11■□□□□ 0.65
AC090049.1-201ENST00000551075 SLC4A2P04920 1241 aa18.88■□□□□ 0.61
AC090049.1-201ENST00000551075 SPINK5Q9NQ38 1064 aaPredicted RBP18.82■□□□□ 0.6
AC090049.1-201ENST00000551075 CAPN15O75808 1086 aa18.76■□□□□ 0.59
AC090049.1-201ENST00000551075 DSG3P32926 999 aa18.74■□□□□ 0.59
AC090049.1-201ENST00000551075 APLP2Q06481 763 aa18.57■□□□□ 0.56
AC090049.1-201ENST00000551075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
AC090049.1-201ENST00000551075 HNRNPUL2Q1KMD3 747 aaKnown RBP18.55■□□□□ 0.56
AC090049.1-201ENST00000551075 ZNF219Q9P2Y4 722 aaPredicted RBP18.47■□□□□ 0.55
AC090049.1-201ENST00000551075 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
AC090049.1-201ENST00000551075 SAMD1Q6SPF0 538 aaPredicted RBP18.43■□□□□ 0.54
AC090049.1-201ENST00000551075 ABCB7O75027 752 aa18.31■□□□□ 0.52
AC090049.1-201ENST00000551075 MYCNP04198 464 aaPredicted RBP18.27■□□□□ 0.52
AC090049.1-201ENST00000551075 SLC4A1APQ9BWU0 796 aaKnown RBP18.16■□□□□ 0.5
AC090049.1-201ENST00000551075 POTEHQ6S545 545 aa18.04■□□□□ 0.48
AC090049.1-201ENST00000551075 FOXD4L1Q9NU39 408 aa18.02■□□□□ 0.48
AC090049.1-201ENST00000551075 POLA2Q14181 598 aa17.95■□□□□ 0.46
AC090049.1-201ENST00000551075 RBM42Q9BTD8 480 aaKnown RBP17.89■□□□□ 0.45
AC090049.1-201ENST00000551075 ATF5Q9Y2D1 282 aaPredicted RBP17.82■□□□□ 0.44
AC090049.1-201ENST00000551075 ZBTB22O15209 634 aa17.73■□□□□ 0.43
AC090049.1-201ENST00000551075 ZBTB12Q9Y330 459 aaPredicted RBP17.64■□□□□ 0.41
AC090049.1-201ENST00000551075 ATXN8OSP0DMR3 200 aa17.52■□□□□ 0.4
AC090049.1-201ENST00000551075 CHRDL2Q6WN34 429 aa17.51■□□□□ 0.39
AC090049.1-201ENST00000551075 AKT1S1Q96B36 256 aa17.46■□□□□ 0.39
AC090049.1-201ENST00000551075 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
AC090049.1-201ENST00000551075 REM2Q8IYK8 340 aaPredicted RBP17.28■□□□□ 0.36
AC090049.1-201ENST00000551075 FBLN2P98095 1184 aa17.14■□□□□ 0.33
AC090049.1-201ENST00000551075 PITPNM1O00562 1244 aa17.09■□□□□ 0.33
AC090049.1-201ENST00000551075 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.32
AC090049.1-201ENST00000551075 SPDYE6P0CI01 402 aa17.08■□□□□ 0.32
AC090049.1-201ENST00000551075 SPDYE2Q495Y8 402 aa17.08■□□□□ 0.32
AC090049.1-201ENST00000551075 PIP4P2Q8N4L2 257 aa17.08■□□□□ 0.32
AC090049.1-201ENST00000551075 MKRN4PQ13434 485 aaPredicted RBP17.03■□□□□ 0.32
AC090049.1-201ENST00000551075 FXR2P51116 673 aaKnown RBP eCLIP17■□□□□ 0.31
AC090049.1-201ENST00000551075 SP7Q8TDD2 431 aaPredicted RBP16.89■□□□□ 0.29
AC090049.1-201ENST00000551075 SSUH2Q9Y2M2 353 aa16.87■□□□□ 0.29
AC090049.1-201ENST00000551075 CSRNP3Q8WYN3 585 aa16.83■□□□□ 0.28
AC090049.1-201ENST00000551075 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
AC090049.1-201ENST00000551075 SPDYE1Q8NFV5 336 aaPredicted RBP16.79■□□□□ 0.28
AC090049.1-201ENST00000551075 HAX1O00165 279 aa16.74■□□□□ 0.27
AC090049.1-201ENST00000551075 CLEC11AQ9Y240 323 aa16.68■□□□□ 0.26
AC090049.1-201ENST00000551075 PRKAR2AP13861 404 aaKnown RBP16.63■□□□□ 0.25
AC090049.1-201ENST00000551075 EVX2Q03828 476 aa16.56■□□□□ 0.24
AC090049.1-201ENST00000551075 PABPN1Q86U42 306 aaKnown RBP eCLIP16.56■□□□□ 0.24
AC090049.1-201ENST00000551075 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
AC090049.1-201ENST00000551075 C19orf67A6NJJ6 358 aa16.45■□□□□ 0.22
AC090049.1-201ENST00000551075 PRR29P0C7W0 189 aa16.44■□□□□ 0.22
AC090049.1-201ENST00000551075 CHADLQ6NUI6 762 aa16.39■□□□□ 0.21
AC090049.1-201ENST00000551075 FARP1Q9Y4F1 1045 aaPredicted RBP16.2■□□□□ 0.18
AC090049.1-201ENST00000551075 GABBR2O75899 941 aa16.19■□□□□ 0.18
AC090049.1-201ENST00000551075 SPDYE4A6NLX3 237 aa16.15■□□□□ 0.18
AC090049.1-201ENST00000551075 STAG3Q9UJ98 1225 aa16.13■□□□□ 0.17
AC090049.1-201ENST00000551075 CD44P16070 742 aaKnown RBP16.09■□□□□ 0.17
AC090049.1-201ENST00000551075 CREBZFQ9NS37 354 aa16.05■□□□□ 0.16
AC090049.1-201ENST00000551075 CLCN6P51797 869 aa15.99■□□□□ 0.15
AC090049.1-201ENST00000551075 ZNF579Q8NAF0 562 aaKnown RBP15.9■□□□□ 0.14
AC090049.1-201ENST00000551075 POTEIP0CG38 1075 aa15.87■□□□□ 0.13
AC090049.1-201ENST00000551075 PROM2Q8N271 834 aa15.85■□□□□ 0.13
AC090049.1-201ENST00000551075 ZRANB1Q9UGI0 708 aa15.85■□□□□ 0.13
AC090049.1-201ENST00000551075 LHX8Q68G74 356 aa15.82■□□□□ 0.12
AC090049.1-201ENST00000551075 MNX1P50219 401 aaPredicted RBP15.8■□□□□ 0.12
AC090049.1-201ENST00000551075 NPM1P06748 294 aaKnown RBP eCLIP15.73■□□□□ 0.11
AC090049.1-201ENST00000551075 PAK3O75914 559 aaPredicted RBP15.7■□□□□ 0.1
AC090049.1-201ENST00000551075 DCBLD2Q96PD2 775 aa15.7■□□□□ 0.1
AC090049.1-201ENST00000551075 GALR2O43603 387 aaPredicted RBP15.67■□□□□ 0.1
AC090049.1-201ENST00000551075 PHF12Q96QT6 1004 aa15.62■□□□□ 0.09
AC090049.1-201ENST00000551075 MS4A3Q96HJ5 214 aa15.43■□□□□ 0.06
AC090049.1-201ENST00000551075 CCDC61Q9Y6R9 512 aa15.42■□□□□ 0.06
AC090049.1-201ENST00000551075 ASTLQ6HA08 431 aaPredicted RBP15.39■□□□□ 0.05
AC090049.1-201ENST00000551075 TSPYL2Q9H2G4 693 aaPredicted RBP15.39■□□□□ 0.05
AC090049.1-201ENST00000551075 PLEKHG5O94827 1062 aa15.38■□□□□ 0.05
AC090049.1-201ENST00000551075 PELP1Q8IZL8 1130 aaKnown RBP15.38■□□□□ 0.05
AC090049.1-201ENST00000551075 MIER1Q8N108 512 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms