RNA–Protein interactions for RNA: ENST00000247829.7

TSPAN8-201, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-201ENST00000247829 AEBP2Q6ZN18 517 aaPredicted RBP26.1■■□□□ 1.77
TSPAN8-201ENST00000247829 CHIC1Q5VXU3 224 aa25.32■■□□□ 1.64
TSPAN8-201ENST00000247829 PHF23Q9BUL5 403 aaPredicted RBP22.3■■□□□ 1.16
TSPAN8-201ENST00000247829 SENP3Q9H4L4 574 aaPredicted RBP22.12■■□□□ 1.13
TSPAN8-201ENST00000247829 FOXD1Q16676 465 aa20.6■□□□□ 0.89
TSPAN8-201ENST00000247829 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
TSPAN8-201ENST00000247829 PPP6R1Q9UPN7 881 aa19.75■□□□□ 0.75
TSPAN8-201ENST00000247829 ADRA2BP18089 450 aa19.72■□□□□ 0.75
TSPAN8-201ENST00000247829 PIAS4Q8N2W9 510 aaPredicted RBP19.36■□□□□ 0.69
TSPAN8-201ENST00000247829 MSH5O43196 834 aa18.99■□□□□ 0.63
TSPAN8-201ENST00000247829 PPP4R3CPQ6ZMV5 832 aa18.06■□□□□ 0.48
TSPAN8-201ENST00000247829 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
TSPAN8-201ENST00000247829 MAPK8IP2Q13387 824 aaPredicted RBP17.95■□□□□ 0.46
TSPAN8-201ENST00000247829 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.41
TSPAN8-201ENST00000247829 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
TSPAN8-201ENST00000247829 CNKSR2Q8WXI2 1034 aa17.57■□□□□ 0.4
TSPAN8-201ENST00000247829 NCBP3Q53F19 620 aaKnown RBP17.53■□□□□ 0.4
TSPAN8-201ENST00000247829 KCNA4P22459 653 aa17.5■□□□□ 0.39
TSPAN8-201ENST00000247829 NPM3O75607 178 aaKnown RBP17.29■□□□□ 0.36
TSPAN8-201ENST00000247829 RNF216Q9NWF9 866 aaPredicted RBP17.26■□□□□ 0.35
TSPAN8-201ENST00000247829 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
TSPAN8-201ENST00000247829 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
TSPAN8-201ENST00000247829 DNAJC5BQ9UF47 199 aa16.76■□□□□ 0.27
TSPAN8-201ENST00000247829 SLC4A1APQ9BWU0 796 aaKnown RBP16.62■□□□□ 0.25
TSPAN8-201ENST00000247829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.22
TSPAN8-201ENST00000247829 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
TSPAN8-201ENST00000247829 RNF39Q9H2S5 420 aa16.29■□□□□ 0.2
TSPAN8-201ENST00000247829 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
TSPAN8-201ENST00000247829 ZBTB22O15209 634 aa16.1■□□□□ 0.17
TSPAN8-201ENST00000247829 FOXD4L1Q9NU39 408 aa16.09■□□□□ 0.17
TSPAN8-201ENST00000247829 C1QBPQ07021 282 aaKnown RBP16.07■□□□□ 0.16
TSPAN8-201ENST00000247829 EHMT2Q96KQ7 1210 aa16.01■□□□□ 0.15
TSPAN8-201ENST00000247829 CACNB1Q02641 598 aaPredicted RBP15.99■□□□□ 0.15
TSPAN8-201ENST00000247829 MYCNP04198 464 aaPredicted RBP15.94■□□□□ 0.14
TSPAN8-201ENST00000247829 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
TSPAN8-201ENST00000247829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.85■□□□□ 0.13
TSPAN8-201ENST00000247829 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
TSPAN8-201ENST00000247829 SAMD1Q6SPF0 538 aaPredicted RBP15.8■□□□□ 0.12
TSPAN8-201ENST00000247829 SPINK5Q9NQ38 1064 aaPredicted RBP15.77■□□□□ 0.12
TSPAN8-201ENST00000247829 CAPN15O75808 1086 aa15.7■□□□□ 0.1
TSPAN8-201ENST00000247829 APLP2Q06481 763 aa15.7■□□□□ 0.1
TSPAN8-201ENST00000247829 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
TSPAN8-201ENST00000247829 ATF5Q9Y2D1 282 aaPredicted RBP15.6■□□□□ 0.09
TSPAN8-201ENST00000247829 ATXN8OSP0DMR3 200 aa15.55■□□□□ 0.08
TSPAN8-201ENST00000247829 ZNF219Q9P2Y4 722 aaPredicted RBP15.53■□□□□ 0.08
TSPAN8-201ENST00000247829 DSG3P32926 999 aa15.46■□□□□ 0.07
TSPAN8-201ENST00000247829 ABCB7O75027 752 aa15.4■□□□□ 0.06
TSPAN8-201ENST00000247829 POLA2Q14181 598 aa15.33■□□□□ 0.04
TSPAN8-201ENST00000247829 ZBTB12Q9Y330 459 aaPredicted RBP14.99□□□□□ -0.01
TSPAN8-201ENST00000247829 FBLN2P98095 1184 aa14.9□□□□□ -0.02
TSPAN8-201ENST00000247829 MKRN4PQ13434 485 aaPredicted RBP14.89□□□□□ -0.03
TSPAN8-201ENST00000247829 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
TSPAN8-201ENST00000247829 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
TSPAN8-201ENST00000247829 SPDYE2BA6NHP3 402 aa14.59□□□□□ -0.07
TSPAN8-201ENST00000247829 SPDYE6P0CI01 402 aa14.59□□□□□ -0.07
TSPAN8-201ENST00000247829 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
TSPAN8-201ENST00000247829 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
TSPAN8-201ENST00000247829 AKT1S1Q96B36 256 aa14.5□□□□□ -0.09
TSPAN8-201ENST00000247829 SPDYE4A6NLX3 237 aa14.48□□□□□ -0.09
TSPAN8-201ENST00000247829 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
TSPAN8-201ENST00000247829 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
TSPAN8-201ENST00000247829 FKBP8Q14318 412 aa14.36□□□□□ -0.11
TSPAN8-201ENST00000247829 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
TSPAN8-201ENST00000247829 PITPNM1O00562 1244 aa14.22□□□□□ -0.13
TSPAN8-201ENST00000247829 SPDYE1Q8NFV5 336 aaPredicted RBP14.2□□□□□ -0.14
TSPAN8-201ENST00000247829 PROM2Q8N271 834 aa14.19□□□□□ -0.14
TSPAN8-201ENST00000247829 CHRDL2Q6WN34 429 aa14.18□□□□□ -0.14
TSPAN8-201ENST00000247829 CLEC11AQ9Y240 323 aa14.18□□□□□ -0.14
TSPAN8-201ENST00000247829 STAG3Q9UJ98 1225 aa14.05□□□□□ -0.16
TSPAN8-201ENST00000247829 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
TSPAN8-201ENST00000247829 FXR2P51116 673 aaKnown RBP eCLIP13.98□□□□□ -0.17
TSPAN8-201ENST00000247829 PIP4P2Q8N4L2 257 aa13.98□□□□□ -0.17
TSPAN8-201ENST00000247829 POTEHQ6S545 545 aa13.9□□□□□ -0.18
TSPAN8-201ENST00000247829 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
TSPAN8-201ENST00000247829 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
TSPAN8-201ENST00000247829 CHADLQ6NUI6 762 aa13.86□□□□□ -0.19
TSPAN8-201ENST00000247829 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
TSPAN8-201ENST00000247829 MIER1Q8N108 512 aa13.78□□□□□ -0.2
TSPAN8-201ENST00000247829 PLCD3Q8N3E9 789 aa13.72□□□□□ -0.21
TSPAN8-201ENST00000247829 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
TSPAN8-201ENST00000247829 VASPP50552 380 aaPredicted RBP13.69□□□□□ -0.22
TSPAN8-201ENST00000247829 MNX1P50219 401 aaPredicted RBP13.66□□□□□ -0.22
TSPAN8-201ENST00000247829 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
TSPAN8-201ENST00000247829 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
TSPAN8-201ENST00000247829 HAX1O00165 279 aa13.59□□□□□ -0.23
TSPAN8-201ENST00000247829 RTN4Q9NQC3 1192 aaKnown RBP13.59□□□□□ -0.23
TSPAN8-201ENST00000247829 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
TSPAN8-201ENST00000247829 IFNLR1Q8IU57 520 aaPredicted RBP13.52□□□□□ -0.25
TSPAN8-201ENST00000247829 KLHL34Q8N239 644 aa13.52□□□□□ -0.25
TSPAN8-201ENST00000247829 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
TSPAN8-201ENST00000247829 C19orf67A6NJJ6 358 aa13.51□□□□□ -0.25
TSPAN8-201ENST00000247829 EVX2Q03828 476 aa13.49□□□□□ -0.25
TSPAN8-201ENST00000247829 CD44P16070 742 aaKnown RBP13.45□□□□□ -0.26
TSPAN8-201ENST00000247829 NUBP1P53384 320 aa13.41□□□□□ -0.26
TSPAN8-201ENST00000247829 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
TSPAN8-201ENST00000247829 TSPYL2Q9H2G4 693 aaPredicted RBP13.37□□□□□ -0.27
TSPAN8-201ENST00000247829 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
TSPAN8-201ENST00000247829 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
TSPAN8-201ENST00000247829 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
TSPAN8-201ENST00000247829 DCAF8Q5TAQ9 597 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms