RNA–Protein interactions for RNA: ENST00000635880.1

GABRA1-211, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GABRA1, Length 1,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-211ENST00000635880 AEBP2Q6ZN18 517 aaPredicted RBP17.24■□□□□ 0.35
GABRA1-211ENST00000635880 CHIC1Q5VXU3 224 aa16.41■□□□□ 0.22
GABRA1-211ENST00000635880 NISCHQ9Y2I1 1504 aa14.82□□□□□ -0.04
GABRA1-211ENST00000635880 SENP3Q9H4L4 574 aaPredicted RBP14.67□□□□□ -0.06
GABRA1-211ENST00000635880 PHF23Q9BUL5 403 aaPredicted RBP14.5□□□□□ -0.09
GABRA1-211ENST00000635880 FOXD1Q16676 465 aa13.68□□□□□ -0.22
GABRA1-211ENST00000635880 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
GABRA1-211ENST00000635880 PLPPR3Q6T4P5 718 aa13.13□□□□□ -0.31
GABRA1-211ENST00000635880 PPP6R1Q9UPN7 881 aa12.85□□□□□ -0.35
GABRA1-211ENST00000635880 ADRA2BP18089 450 aa12.79□□□□□ -0.36
GABRA1-211ENST00000635880 MSH5O43196 834 aa12.77□□□□□ -0.36
GABRA1-211ENST00000635880 PIAS4Q8N2W9 510 aaPredicted RBP12.77□□□□□ -0.36
GABRA1-211ENST00000635880 CCDC180Q9P1Z9 1646 aa12.6□□□□□ -0.39
GABRA1-211ENST00000635880 ZCCHC6Q5VYS8 1495 aaKnown RBP12.53□□□□□ -0.4
GABRA1-211ENST00000635880 SHROOM4Q9ULL8 1493 aa12.49□□□□□ -0.41
GABRA1-211ENST00000635880 SUPT5HO00267 1087 aaKnown RBP12.31□□□□□ -0.44
GABRA1-211ENST00000635880 DCAF1Q9Y4B6 1507 aa12.25□□□□□ -0.45
GABRA1-211ENST00000635880 DCAF8L2P0C7V8 631 aa12.2□□□□□ -0.46
GABRA1-211ENST00000635880 MYO15BQ96JP2 1530 aa11.91□□□□□ -0.5
GABRA1-211ENST00000635880 ABCC9O60706 1549 aa11.78□□□□□ -0.52
GABRA1-211ENST00000635880 MAPK8IP2Q13387 824 aaPredicted RBP11.74□□□□□ -0.53
GABRA1-211ENST00000635880 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
GABRA1-211ENST00000635880 HRCP23327 699 aa11.71□□□□□ -0.54
GABRA1-211ENST00000635880 SCRIBQ14160 1630 aa11.7□□□□□ -0.54
GABRA1-211ENST00000635880 NACADO15069 1562 aa11.69□□□□□ -0.54
GABRA1-211ENST00000635880 SCAF1Q9H7N4 1312 aaKnown RBP11.69□□□□□ -0.54
GABRA1-211ENST00000635880 DMRT2Q9Y5R5 561 aa11.65□□□□□ -0.54
GABRA1-211ENST00000635880 PCGF6Q9BYE7 350 aa11.63□□□□□ -0.55
GABRA1-211ENST00000635880 LOC105371045A0A1W2PR82 267 aa11.62□□□□□ -0.55
GABRA1-211ENST00000635880 RB1CC1Q8TDY2 1594 aa11.6□□□□□ -0.55
GABRA1-211ENST00000635880 TRIM41Q8WV44 630 aa11.55□□□□□ -0.56
GABRA1-211ENST00000635880 TRIM26Q12899 539 aaPredicted RBP11.52□□□□□ -0.57
GABRA1-211ENST00000635880 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
GABRA1-211ENST00000635880 CECR2Q9BXF3 1484 aa11.49□□□□□ -0.57
GABRA1-211ENST00000635880 MROH2BQ7Z745 1585 aa11.46□□□□□ -0.57
GABRA1-211ENST00000635880 BAZ1AQ9NRL2 1556 aaPredicted RBP11.39□□□□□ -0.59
GABRA1-211ENST00000635880 WIZO95785 1651 aa11.36□□□□□ -0.59
GABRA1-211ENST00000635880 ZEB1P37275 1124 aaPredicted RBP11.35□□□□□ -0.59
GABRA1-211ENST00000635880 FAM9AQ8IZU1 332 aaPredicted RBP11.35□□□□□ -0.59
GABRA1-211ENST00000635880 PPARGC1BQ86YN6 1023 aaKnown RBP11.32□□□□□ -0.6
GABRA1-211ENST00000635880 CNKSR2Q8WXI2 1034 aa11.29□□□□□ -0.6
GABRA1-211ENST00000635880 TOP2AP11388 1531 aaKnown RBP11.27□□□□□ -0.61
GABRA1-211ENST00000635880 KCNA4P22459 653 aa11.26□□□□□ -0.61
GABRA1-211ENST00000635880 HOXD11P31277 338 aaPredicted RBP11.26□□□□□ -0.61
GABRA1-211ENST00000635880 SMARCA4P51532 1647 aa11.24□□□□□ -0.61
GABRA1-211ENST00000635880 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
GABRA1-211ENST00000635880 CCDC88BA6NC98 1476 aa11.21□□□□□ -0.61
GABRA1-211ENST00000635880 SMARCA2P51531 1590 aa11.18□□□□□ -0.62
GABRA1-211ENST00000635880 RNF216Q9NWF9 866 aaPredicted RBP11.18□□□□□ -0.62
GABRA1-211ENST00000635880 EHMT2Q96KQ7 1210 aa11.15□□□□□ -0.62
GABRA1-211ENST00000635880 EEA1Q15075 1411 aa11.14□□□□□ -0.63
GABRA1-211ENST00000635880 UNC13AQ9UPW8 1703 aa11.14□□□□□ -0.63
GABRA1-211ENST00000635880 DCAF8L1A6NGE4 600 aa11.13□□□□□ -0.63
GABRA1-211ENST00000635880 WRNQ14191 1432 aaPredicted RBP eCLIP11.1□□□□□ -0.63
GABRA1-211ENST00000635880 ABCC8Q09428 1581 aa11.09□□□□□ -0.63
GABRA1-211ENST00000635880 PEG3Q9GZU2 1588 aa11.09□□□□□ -0.63
GABRA1-211ENST00000635880 TNIKQ9UKE5 1360 aa11.09□□□□□ -0.63
GABRA1-211ENST00000635880 BICRAQ9NZM4 1560 aa11.09□□□□□ -0.63
GABRA1-211ENST00000635880 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.64
GABRA1-211ENST00000635880 PABPN1Q86U42 306 aaKnown RBP eCLIP11.07□□□□□ -0.64
GABRA1-211ENST00000635880 NCBP3Q53F19 620 aaKnown RBP11.06□□□□□ -0.64
GABRA1-211ENST00000635880 SOGA1O94964 1423 aa11.04□□□□□ -0.64
GABRA1-211ENST00000635880 CEP162Q5TB80 1403 aa11.03□□□□□ -0.64
GABRA1-211ENST00000635880 ATAD2BQ9ULI0 1458 aa11□□□□□ -0.65
GABRA1-211ENST00000635880 GOLGA3Q08378 1498 aa10.99□□□□□ -0.65
GABRA1-211ENST00000635880 UBTFP17480 764 aaKnown RBP10.98□□□□□ -0.65
GABRA1-211ENST00000635880 CCER1Q8TC90 406 aaPredicted RBP10.98□□□□□ -0.65
GABRA1-211ENST00000635880 CACNB1Q02641 598 aaPredicted RBP10.96□□□□□ -0.65
GABRA1-211ENST00000635880 RUSC2Q8N2Y8 1516 aa10.96□□□□□ -0.66
GABRA1-211ENST00000635880 BAZ1BQ9UIG0 1483 aaKnown RBP10.95□□□□□ -0.66
GABRA1-211ENST00000635880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.94□□□□□ -0.66
GABRA1-211ENST00000635880 CEP164Q9UPV0 1460 aa10.94□□□□□ -0.66
GABRA1-211ENST00000635880 NPM3O75607 178 aaKnown RBP10.93□□□□□ -0.66
GABRA1-211ENST00000635880 RNF39Q9H2S5 420 aa10.92□□□□□ -0.66
GABRA1-211ENST00000635880 KIF21BO75037 1637 aa10.9□□□□□ -0.67
GABRA1-211ENST00000635880 SYNJ1O43426 1573 aa10.89□□□□□ -0.67
GABRA1-211ENST00000635880 DNAJC5BQ9UF47 199 aa10.87□□□□□ -0.67
GABRA1-211ENST00000635880 CLIP1P30622 1438 aa10.85□□□□□ -0.67
GABRA1-211ENST00000635880 NCAPD3P42695 1498 aa10.82□□□□□ -0.68
GABRA1-211ENST00000635880 VPS8Q8N3P4 1428 aa10.81□□□□□ -0.68
GABRA1-211ENST00000635880 TTBK1Q5TCY1 1321 aaPredicted RBP10.81□□□□□ -0.68
GABRA1-211ENST00000635880 TOP2BQ02880 1626 aa10.81□□□□□ -0.68
GABRA1-211ENST00000635880 APLP2Q06481 763 aa10.81□□□□□ -0.68
GABRA1-211ENST00000635880 HMGXB3Q12766 1538 aa10.8□□□□□ -0.68
GABRA1-211ENST00000635880 RAPGEF2Q9Y4G8 1499 aa10.78□□□□□ -0.68
GABRA1-211ENST00000635880 DIEXFQ68CQ4 756 aaKnown RBP10.77□□□□□ -0.69
GABRA1-211ENST00000635880 BIVM-ERCC5R4GMW8 1640 aa10.76□□□□□ -0.69
GABRA1-211ENST00000635880 C1QBPQ07021 282 aaKnown RBP10.75□□□□□ -0.69
GABRA1-211ENST00000635880 ERICH3Q5RHP9 1530 aa10.75□□□□□ -0.69
GABRA1-211ENST00000635880 PRXQ9BXM0 1461 aa10.75□□□□□ -0.69
GABRA1-211ENST00000635880 ZNF316A6NFI3 1004 aaPredicted RBP10.72□□□□□ -0.69
GABRA1-211ENST00000635880 CFTRP13569 1480 aa10.71□□□□□ -0.69
GABRA1-211ENST00000635880 KIF27Q86VH2 1401 aa10.71□□□□□ -0.7
GABRA1-211ENST00000635880 HNRNPUL2Q1KMD3 747 aaKnown RBP10.7□□□□□ -0.7
GABRA1-211ENST00000635880 ACIN1Q9UKV3 1341 aaKnown RBP10.7□□□□□ -0.7
GABRA1-211ENST00000635880 PELP1Q8IZL8 1130 aaKnown RBP10.7□□□□□ -0.7
GABRA1-211ENST00000635880 SLC4A1APQ9BWU0 796 aaKnown RBP10.7□□□□□ -0.7
GABRA1-211ENST00000635880 CENPBP07199 599 aaPredicted RBP10.69□□□□□ -0.7
GABRA1-211ENST00000635880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.7
GABRA1-211ENST00000635880 CUX1P39880 1505 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms