Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SCN2BO60939 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.96□□□□□ -1.46
SCN2BO60939 AC006509.1-201ENST00000420788 634 ntBASIC5.96□□□□□ -1.46
SCN2BO60939 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.96□□□□□ -1.46
SCN2BO60939 HMGN1P32-201ENST00000441744 256 ntBASIC5.96□□□□□ -1.46
SCN2BO60939 AC079922.1-201ENST00000443291 359 ntBASIC5.96□□□□□ -1.46
SCN2BO60939 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.96□□□□□ -1.46
SCN2BO60939 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
SCN2BO60939 AC008945.1-201ENST00000505144 499 ntBASIC5.96□□□□□ -1.46
SCN2BO60939 MINOS1P4-201ENST00000515470 318 ntBASIC5.96□□□□□ -1.46
SCN2BO60939 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.96□□□□□ -1.46
SCN2BO60939 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.96□□□□□ -1.46
SCN2BO60939 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.96□□□□□ -1.46
SCN2BO60939 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.96□□□□□ -1.46
SCN2BO60939 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.96□□□□□ -1.46
SCN2BO60939 RPL3P13-201ENST00000550415 216 ntBASIC5.96□□□□□ -1.46
SCN2BO60939 AC007494.1-201ENST00000562293 760 ntBASIC5.96□□□□□ -1.46
SCN2BO60939 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.96□□□□□ -1.46
SCN2BO60939 AC005332.4-201ENST00000592752 579 ntBASIC5.96□□□□□ -1.46
SCN2BO60939 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.96□□□□□ -1.46
SCN2BO60939 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.96□□□□□ -1.46
SCN2BO60939 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.96□□□□□ -1.46
SCN2BO60939 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.96□□□□□ -1.46
SCN2BO60939 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN2BO60939 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.96□□□□□ -1.46
SCN2BO60939 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN2BO60939 AC125238.2-201ENST00000430003 1440 ntBASIC5.96□□□□□ -1.46
SCN2BO60939 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.96□□□□□ -1.46
SCN2BO60939 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.96□□□□□ -1.46
SCN2BO60939 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SCN2BO60939 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN2BO60939 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN2BO60939 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SCN2BO60939 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.96□□□□□ -1.46
SCN2BO60939 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN2BO60939 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN2BO60939 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
SCN2BO60939 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.95□□□□□ -1.46
SCN2BO60939 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN2BO60939 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCN2BO60939 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SCN2BO60939 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCN2BO60939 RNU1-59P-201ENST00000364829 162 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCN2BO60939 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.95□□□□□ -1.46
SCN2BO60939 AP003385.1-201ENST00000426387 893 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 AL354707.3-201ENST00000427308 331 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN2BO60939 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.95□□□□□ -1.46
SCN2BO60939 VPS25P1-201ENST00000455691 508 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN2BO60939 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN2BO60939 AC128716.1-201ENST00000475129 166 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 RN7SL267P-201ENST00000485107 261 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN2BO60939 AC009567.2-201ENST00000502989 349 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.95□□□□□ -1.46
SCN2BO60939 AC093664.1-201ENST00000511779 289 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 IGHV4-55-201ENST00000520889 368 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 AC008429.4-201ENST00000521201 182 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN2BO60939 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.95□□□□□ -1.46
SCN2BO60939 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
SCN2BO60939 RPL41P2-201ENST00000544920 409 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.95□□□□□ -1.46
SCN2BO60939 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN2BO60939 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.95□□□□□ -1.46
SCN2BO60939 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.95□□□□□ -1.46
SCN2BO60939 CHEK2P2-201ENST00000554701 672 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.95□□□□□ -1.46
SCN2BO60939 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.95□□□□□ -1.46
SCN2BO60939 AC012175.1-201ENST00000603755 531 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 AC006924.1-201ENST00000610750 559 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN2BO60939 U1.25-201ENST00000614085 162 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN2BO60939 U1.34-201ENST00000618578 162 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN2BO60939 U1.31-201ENST00000620022 160 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN2BO60939 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN2BO60939 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SCN2BO60939 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SCN2BO60939 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCN2BO60939 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCN2BO60939 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SCN2BO60939 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN2BO60939 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCN2BO60939 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCN2BO60939 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SCN2BO60939 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.95□□□□□ -1.46
SCN2BO60939 AL137058.3-201ENST00000624531 3099 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.95□□□□□ -1.46
SCN2BO60939 AC005725.1-201ENST00000577346 2607 ntBASIC5.95□□□□□ -1.46
SCN2BO60939 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SCN2BO60939 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SCN2BO60939 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SCN2BO60939 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.94□□□□□ -1.46
SCN2BO60939 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
SCN2BO60939 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms