RNA–Protein interactions for RNA: ENST00000404115.7

CUL4B-204, Transcript of cullin 4B, humanhuman

TSL 1 (best) BASIC

Gene CUL4B, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4B-204ENST00000404115 PELP1Q8IZL8 1130 aaKnown RBP11.2□□□□□ -0.62
CUL4B-204ENST00000404115 MYT1Q01538 1121 aa11.06□□□□□ -0.64
CUL4B-204ENST00000404115 TTBK1Q5TCY1 1321 aaPredicted RBP10.75□□□□□ -0.69
CUL4B-204ENST00000404115 HRCP23327 699 aa10.52□□□□□ -0.73
CUL4B-204ENST00000404115 NISCHQ9Y2I1 1504 aa10.41□□□□□ -0.74
CUL4B-204ENST00000404115 SCAF1Q9H7N4 1312 aaKnown RBP10.1□□□□□ -0.79
CUL4B-204ENST00000404115 CCDC180Q9P1Z9 1646 aa10.04□□□□□ -0.8
CUL4B-204ENST00000404115 APLP2Q06481 763 aa10.02□□□□□ -0.8
CUL4B-204ENST00000404115 DCAF1Q9Y4B6 1507 aa10.01□□□□□ -0.81
CUL4B-204ENST00000404115 MYO15BQ96JP2 1530 aa9.93□□□□□ -0.82
CUL4B-204ENST00000404115 PRKCSHP14314 528 aaPredicted RBP9.9□□□□□ -0.82
CUL4B-204ENST00000404115 ERICH6Q7L0X2 663 aa9.89□□□□□ -0.83
CUL4B-204ENST00000404115 ZEB1P37275 1124 aaPredicted RBP9.81□□□□□ -0.84
CUL4B-204ENST00000404115 BCL11AQ9H165 835 aa9.78□□□□□ -0.84
CUL4B-204ENST00000404115 ACIN1Q9UKV3 1341 aaKnown RBP9.77□□□□□ -0.85
CUL4B-204ENST00000404115 PPARGC1BQ86YN6 1023 aaKnown RBP9.77□□□□□ -0.85
CUL4B-204ENST00000404115 CENPBP07199 599 aaPredicted RBP9.68□□□□□ -0.86
CUL4B-204ENST00000404115 FAM9AQ8IZU1 332 aaPredicted RBP9.66□□□□□ -0.86
CUL4B-204ENST00000404115 PCGF6Q9BYE7 350 aa9.57□□□□□ -0.88
CUL4B-204ENST00000404115 NEUROD1Q13562 356 aa9.55□□□□□ -0.88
CUL4B-204ENST00000404115 CLSPNQ9HAW4 1339 aa9.55□□□□□ -0.88
CUL4B-204ENST00000404115 ANP32EQ9BTT0 268 aa9.55□□□□□ -0.88
CUL4B-204ENST00000404115 TRIM26Q12899 539 aaPredicted RBP9.54□□□□□ -0.88
CUL4B-204ENST00000404115 SLC24A1O60721 1099 aa9.5□□□□□ -0.89
CUL4B-204ENST00000404115 GTF3C3Q9Y5Q9 886 aa9.48□□□□□ -0.89
CUL4B-204ENST00000404115 DAXXQ9UER7 740 aaPredicted RBP9.41□□□□□ -0.9
CUL4B-204ENST00000404115 CHIC1Q5VXU3 224 aa9.39□□□□□ -0.91
CUL4B-204ENST00000404115 UBE2Q2Q8WVN8 375 aa9.3□□□□□ -0.92
CUL4B-204ENST00000404115 TRIM41Q8WV44 630 aa9.28□□□□□ -0.92
CUL4B-204ENST00000404115 CSRNP3Q8WYN3 585 aa9.27□□□□□ -0.92
CUL4B-204ENST00000404115 MYT1LQ9UL68 1186 aa9.27□□□□□ -0.93
CUL4B-204ENST00000404115 ERICH6BQ5W0A0 696 aa9.24□□□□□ -0.93
CUL4B-204ENST00000404115 TSHZ2Q9NRE2 1034 aa9.21□□□□□ -0.94
CUL4B-204ENST00000404115 DIEXFQ68CQ4 756 aaKnown RBP9.15□□□□□ -0.94
CUL4B-204ENST00000404115 SUPT16HQ9Y5B9 1047 aaKnown RBP9.08□□□□□ -0.96
CUL4B-204ENST00000404115 EIF5BO60841 1220 aaKnown RBP9.06□□□□□ -0.96
CUL4B-204ENST00000404115 ZCCHC6Q5VYS8 1495 aaKnown RBP9.06□□□□□ -0.96
CUL4B-204ENST00000404115 FANCIQ9NVI1 1328 aa9.04□□□□□ -0.96
CUL4B-204ENST00000404115 ZNF316A6NFI3 1004 aaPredicted RBP8.98□□□□□ -0.97
CUL4B-204ENST00000404115 WRNQ14191 1432 aaPredicted RBP eCLIP8.98□□□□□ -0.97
CUL4B-204ENST00000404115 ANO8Q9HCE9 1232 aaPredicted RBP8.96□□□□□ -0.98
CUL4B-204ENST00000404115 MSH5O43196 834 aa8.9□□□□□ -0.98
CUL4B-204ENST00000404115 RBM19Q9Y4C8 960 aaKnown RBP8.88□□□□□ -0.99
CUL4B-204ENST00000404115 C11orf95C9JLR9 678 aaPredicted RBP8.86□□□□□ -0.99
CUL4B-204ENST00000404115 LOC105371045A0A1W2PR82 267 aa8.84□□□□□ -0.99
CUL4B-204ENST00000404115 PKNOX2Q96KN3 472 aa8.84□□□□□ -0.99
CUL4B-204ENST00000404115 MIER1Q8N108 512 aa8.83□□□□□ -1
CUL4B-204ENST00000404115 SALL2Q9Y467 1007 aaPredicted RBP8.82□□□□□ -1
CUL4B-204ENST00000404115 DEKP35659 375 aaKnown RBP8.8□□□□□ -1
CUL4B-204ENST00000404115 SUPT5HO00267 1087 aaKnown RBP8.79□□□□□ -1
CUL4B-204ENST00000404115 WASHC2CQ9Y4E1 1318 aa8.74□□□□□ -1.01
CUL4B-204ENST00000404115 WASHC2AQ641Q2 1341 aa8.74□□□□□ -1.01
CUL4B-204ENST00000404115 ABCC9O60706 1549 aa8.74□□□□□ -1.01
CUL4B-204ENST00000404115 CCER1Q8TC90 406 aaPredicted RBP8.71□□□□□ -1.02
CUL4B-204ENST00000404115 PODXL2Q9NZ53 605 aa8.71□□□□□ -1.02
CUL4B-204ENST00000404115 EIF4G1Q04637 1599 aaKnown RBP8.68□□□□□ -1.02
CUL4B-204ENST00000404115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.66□□□□□ -1.02
CUL4B-204ENST00000404115 NCAPD3P42695 1498 aa8.65□□□□□ -1.02
CUL4B-204ENST00000404115 PLEKHG5O94827 1062 aa8.64□□□□□ -1.03
CUL4B-204ENST00000404115 RB1CC1Q8TDY2 1594 aa8.64□□□□□ -1.03
CUL4B-204ENST00000404115 CUX2O14529 1486 aa8.64□□□□□ -1.03
CUL4B-204ENST00000404115 NEFLP07196 543 aa8.63□□□□□ -1.03
CUL4B-204ENST00000404115 RSPH6AQ9H0K4 717 aa8.63□□□□□ -1.03
CUL4B-204ENST00000404115 USP35Q9P2H5 1018 aa8.63□□□□□ -1.03
CUL4B-204ENST00000404115 SHROOM4Q9ULL8 1493 aa8.63□□□□□ -1.03
CUL4B-204ENST00000404115 YTHDC1Q96MU7 727 aaKnown RBP8.58□□□□□ -1.04
CUL4B-204ENST00000404115 ARXQ96QS3 562 aa8.57□□□□□ -1.04
CUL4B-204ENST00000404115 CENPJQ9HC77 1338 aaPredicted RBP8.56□□□□□ -1.04
CUL4B-204ENST00000404115 NACADO15069 1562 aa8.56□□□□□ -1.04
CUL4B-204ENST00000404115 GLIPR1L2Q4G1C9 344 aa8.56□□□□□ -1.04
CUL4B-204ENST00000404115 EEA1Q15075 1411 aa8.56□□□□□ -1.04
CUL4B-204ENST00000404115 FGD1P98174 961 aa8.55□□□□□ -1.04
CUL4B-204ENST00000404115 NCBP3Q53F19 620 aaKnown RBP8.55□□□□□ -1.04
CUL4B-204ENST00000404115 CCDC136Q96JN2 1154 aa8.55□□□□□ -1.04
CUL4B-204ENST00000404115 CCER2I3L3R5 266 aa8.53□□□□□ -1.04
CUL4B-204ENST00000404115 IL27Q8NEV9 243 aa8.53□□□□□ -1.04
CUL4B-204ENST00000404115 ZMYND15Q9H091 742 aa8.53□□□□□ -1.04
CUL4B-204ENST00000404115 NOP58Q9Y2X3 529 aaKnown RBP8.53□□□□□ -1.04
CUL4B-204ENST00000404115 FAM43AQ8N2R8 423 aa8.51□□□□□ -1.05
CUL4B-204ENST00000404115 AAMPQ13685 434 aa8.51□□□□□ -1.05
CUL4B-204ENST00000404115 PEG3Q9GZU2 1588 aa8.51□□□□□ -1.05
CUL4B-204ENST00000404115 SMARCA2P51531 1590 aa8.5□□□□□ -1.05
CUL4B-204ENST00000404115 TNIKQ9UKE5 1360 aa8.48□□□□□ -1.05
CUL4B-204ENST00000404115 RRP9O43818 475 aaKnown RBP8.48□□□□□ -1.05
CUL4B-204ENST00000404115 FKBP8Q14318 412 aa8.48□□□□□ -1.05
CUL4B-204ENST00000404115 CDK11AQ9UQ88 783 aaPredicted RBP8.46□□□□□ -1.06
CUL4B-204ENST00000404115 PDIA4P13667 645 aaKnown RBP8.44□□□□□ -1.06
CUL4B-204ENST00000404115 DHX57Q6P158 1386 aaKnown RBP8.44□□□□□ -1.06
CUL4B-204ENST00000404115 IPO9Q96P70 1041 aaKnown RBP8.43□□□□□ -1.06
CUL4B-204ENST00000404115 PDE4CQ08493 712 aa8.42□□□□□ -1.06
CUL4B-204ENST00000404115 RSF1Q96T23 1441 aaPredicted RBP8.42□□□□□ -1.06
CUL4B-204ENST00000404115 CEP162Q5TB80 1403 aa8.42□□□□□ -1.06
CUL4B-204ENST00000404115 PRDM4Q9UKN5 801 aa8.41□□□□□ -1.06
CUL4B-204ENST00000404115 CALD1Q05682 793 aaKnown RBP8.4□□□□□ -1.06
CUL4B-204ENST00000404115 TAF7LQ5H9L4 462 aa8.4□□□□□ -1.06
CUL4B-204ENST00000404115 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.39□□□□□ -1.07
CUL4B-204ENST00000404115 KIF21BO75037 1637 aa8.39□□□□□ -1.07
CUL4B-204ENST00000404115 RSPH4AQ5TD94 716 aa8.39□□□□□ -1.07
CUL4B-204ENST00000404115 PPP4R2Q9NY27 417 aa8.39□□□□□ -1.07
CUL4B-204ENST00000404115 PAK3O75914 559 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms