Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 FMO9P-202ENST00000488458 1535 ntBASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 HSPD1P5-201ENST00000511127 1720 ntBASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 HSPD1P4-201ENST00000547203 1702 ntBASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 AC078795.1-201ENST00000602342 3143 ntBASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SCUBE3Q8IX30 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 HRH4-201ENST00000256906 3668 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC017007.4-201ENST00000503353 1352 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC090983.1-201ENST00000623426 3897 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC114324.1-201ENST00000504077 3152 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 TRIM53BP-201ENST00000532912 1720 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 RNU6-1090P-201ENST00000364065 94 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 Y_RNA.279-201ENST00000364763 95 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 MTCO3P40-201ENST00000392516 676 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 RFKP1-201ENST00000400940 428 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 RANP6-201ENST00000413691 644 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 MTCO2P12-201ENST00000427426 682 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC073464.1-201ENST00000429823 534 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 RPL12P4-201ENST00000432629 497 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 DEFA9P-201ENST00000433042 285 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC108059.2-201ENST00000434626 151 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC244505.5-201ENST00000443639 207 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 USP9YP12-201ENST00000450481 570 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 VDAC2P4-201ENST00000452925 711 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 TXNP3-201ENST00000454560 301 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 RPL12P32-201ENST00000484010 494 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 RN7SL864P-201ENST00000493457 285 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC111000.3-201ENST00000508057 576 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 FGF7P4-201ENST00000509595 295 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 MTCYBP43-201ENST00000513621 740 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 CR383656.6-201ENST00000550518 394 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC113554.1-201ENST00000606284 490 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AL359535.1-201ENST00000612100 1087 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 RN7SL113P-201ENST00000619959 299 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AC087821.2-201ENST00000637086 450 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 AF121897.1-201ENST00000411867 3980 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 TARS2P1-201ENST00000506124 2041 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 ASAP1-IT2-201ENST00000626977 2031 ntBASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC8.61□□□□□ -1.03
SCUBE3Q8IX30 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms