RNA–Protein interactions for RNA: ENST00000392516.4

MTCO3P40-201, Transcript of MT-CO3 pseudogene 40, humanhuman

BASIC

Gene MTCO3P40, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCO3P40-201ENST00000392516 AEBP2Q6ZN18 517 aaPredicted RBP21.88■■□□□ 1.09
MTCO3P40-201ENST00000392516 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
MTCO3P40-201ENST00000392516 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
MTCO3P40-201ENST00000392516 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
MTCO3P40-201ENST00000392516 FOXD1Q16676 465 aa17.3■□□□□ 0.36
MTCO3P40-201ENST00000392516 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
MTCO3P40-201ENST00000392516 PPP6R1Q9UPN7 881 aa16.46■□□□□ 0.23
MTCO3P40-201ENST00000392516 ADRA2BP18089 450 aa16.42■□□□□ 0.22
MTCO3P40-201ENST00000392516 PIAS4Q8N2W9 510 aaPredicted RBP16.25■□□□□ 0.19
MTCO3P40-201ENST00000392516 MSH5O43196 834 aa16.05■□□□□ 0.16
MTCO3P40-201ENST00000392516 POTEDQ86YR6 584 aa15.93■□□□□ 0.14
MTCO3P40-201ENST00000392516 SCAF1Q9H7N4 1312 aaKnown RBP15.03■□□□□ -0
MTCO3P40-201ENST00000392516 MAPK8IP2Q13387 824 aaPredicted RBP14.98□□□□□ -0.01
MTCO3P40-201ENST00000392516 PPP4R3CPQ6ZMV5 832 aa14.98□□□□□ -0.01
MTCO3P40-201ENST00000392516 DMRT2Q9Y5R5 561 aa14.81□□□□□ -0.04
MTCO3P40-201ENST00000392516 CNKSR2Q8WXI2 1034 aa14.61□□□□□ -0.07
MTCO3P40-201ENST00000392516 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
MTCO3P40-201ENST00000392516 HOXD11P31277 338 aaPredicted RBP14.41□□□□□ -0.1
MTCO3P40-201ENST00000392516 RNF216Q9NWF9 866 aaPredicted RBP14.4□□□□□ -0.1
MTCO3P40-201ENST00000392516 KCNA4P22459 653 aa14.35□□□□□ -0.11
MTCO3P40-201ENST00000392516 NPM3O75607 178 aaKnown RBP14.3□□□□□ -0.12
MTCO3P40-201ENST00000392516 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
MTCO3P40-201ENST00000392516 DNAJC5BQ9UF47 199 aa13.93□□□□□ -0.18
MTCO3P40-201ENST00000392516 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
MTCO3P40-201ENST00000392516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.73□□□□□ -0.21
MTCO3P40-201ENST00000392516 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
MTCO3P40-201ENST00000392516 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
MTCO3P40-201ENST00000392516 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
MTCO3P40-201ENST00000392516 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
MTCO3P40-201ENST00000392516 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
MTCO3P40-201ENST00000392516 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
MTCO3P40-201ENST00000392516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.22□□□□□ -0.29
MTCO3P40-201ENST00000392516 HNRNPUL2Q1KMD3 747 aaKnown RBP13.22□□□□□ -0.29
MTCO3P40-201ENST00000392516 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
MTCO3P40-201ENST00000392516 ZBTB22O15209 634 aa13.2□□□□□ -0.3
MTCO3P40-201ENST00000392516 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
MTCO3P40-201ENST00000392516 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
MTCO3P40-201ENST00000392516 CAPN15O75808 1086 aa13.14□□□□□ -0.31
MTCO3P40-201ENST00000392516 APLP2Q06481 763 aa13.13□□□□□ -0.31
MTCO3P40-201ENST00000392516 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
MTCO3P40-201ENST00000392516 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
MTCO3P40-201ENST00000392516 DSG3P32926 999 aa12.98□□□□□ -0.33
MTCO3P40-201ENST00000392516 EHMT2Q96KQ7 1210 aa12.94□□□□□ -0.34
MTCO3P40-201ENST00000392516 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
MTCO3P40-201ENST00000392516 ATF5Q9Y2D1 282 aaPredicted RBP12.89□□□□□ -0.35
MTCO3P40-201ENST00000392516 ABCB7O75027 752 aa12.86□□□□□ -0.35
MTCO3P40-201ENST00000392516 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
MTCO3P40-201ENST00000392516 POLA2Q14181 598 aa12.76□□□□□ -0.37
MTCO3P40-201ENST00000392516 ZBTB12Q9Y330 459 aaPredicted RBP12.51□□□□□ -0.41
MTCO3P40-201ENST00000392516 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
MTCO3P40-201ENST00000392516 FBLN2P98095 1184 aa12.35□□□□□ -0.43
MTCO3P40-201ENST00000392516 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
MTCO3P40-201ENST00000392516 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
MTCO3P40-201ENST00000392516 POTEHQ6S545 545 aa12.23□□□□□ -0.45
MTCO3P40-201ENST00000392516 AKT1S1Q96B36 256 aa12.16□□□□□ -0.46
MTCO3P40-201ENST00000392516 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
MTCO3P40-201ENST00000392516 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
MTCO3P40-201ENST00000392516 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
MTCO3P40-201ENST00000392516 ZNF692Q9BU19 519 aaPredicted RBP12.08□□□□□ -0.48
MTCO3P40-201ENST00000392516 REM2Q8IYK8 340 aaPredicted RBP12.06□□□□□ -0.48
MTCO3P40-201ENST00000392516 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
MTCO3P40-201ENST00000392516 CHRDL2Q6WN34 429 aa11.96□□□□□ -0.49
MTCO3P40-201ENST00000392516 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
MTCO3P40-201ENST00000392516 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
MTCO3P40-201ENST00000392516 PABPN1Q86U42 306 aaKnown RBP eCLIP11.91□□□□□ -0.5
MTCO3P40-201ENST00000392516 SPDYE1Q8NFV5 336 aaPredicted RBP11.85□□□□□ -0.51
MTCO3P40-201ENST00000392516 CLEC11AQ9Y240 323 aa11.82□□□□□ -0.52
MTCO3P40-201ENST00000392516 PIP4P2Q8N4L2 257 aa11.76□□□□□ -0.53
MTCO3P40-201ENST00000392516 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.53
MTCO3P40-201ENST00000392516 PRR29P0C7W0 189 aa11.68□□□□□ -0.54
MTCO3P40-201ENST00000392516 FKBP8Q14318 412 aa11.68□□□□□ -0.54
MTCO3P40-201ENST00000392516 PROM2Q8N271 834 aa11.68□□□□□ -0.54
MTCO3P40-201ENST00000392516 STAG3Q9UJ98 1225 aa11.65□□□□□ -0.54
MTCO3P40-201ENST00000392516 PRKAR2AP13861 404 aaKnown RBP11.61□□□□□ -0.55
MTCO3P40-201ENST00000392516 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
MTCO3P40-201ENST00000392516 CREBZFQ9NS37 354 aa11.47□□□□□ -0.57
MTCO3P40-201ENST00000392516 HAX1O00165 279 aa11.45□□□□□ -0.58
MTCO3P40-201ENST00000392516 FARP1Q9Y4F1 1045 aaPredicted RBP11.43□□□□□ -0.58
MTCO3P40-201ENST00000392516 C19orf67A6NJJ6 358 aa11.35□□□□□ -0.59
MTCO3P40-201ENST00000392516 EVX2Q03828 476 aa11.34□□□□□ -0.59
MTCO3P40-201ENST00000392516 FBXO3Q9UK99 471 aa11.34□□□□□ -0.59
MTCO3P40-201ENST00000392516 MNX1P50219 401 aaPredicted RBP11.33□□□□□ -0.6
MTCO3P40-201ENST00000392516 MIER1Q8N108 512 aa11.33□□□□□ -0.6
MTCO3P40-201ENST00000392516 SP7Q8TDD2 431 aaPredicted RBP11.3□□□□□ -0.6
MTCO3P40-201ENST00000392516 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
MTCO3P40-201ENST00000392516 PLEKHG5O94827 1062 aa11.27□□□□□ -0.61
MTCO3P40-201ENST00000392516 NPM1P06748 294 aaKnown RBP eCLIP11.27□□□□□ -0.61
MTCO3P40-201ENST00000392516 CD44P16070 742 aaKnown RBP11.26□□□□□ -0.61
MTCO3P40-201ENST00000392516 VASPP50552 380 aaPredicted RBP11.19□□□□□ -0.62
MTCO3P40-201ENST00000392516 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
MTCO3P40-201ENST00000392516 ZRANB1Q9UGI0 708 aa11.16□□□□□ -0.62
MTCO3P40-201ENST00000392516 PAK3O75914 559 aaPredicted RBP11.14□□□□□ -0.63
MTCO3P40-201ENST00000392516 GABBR2O75899 941 aa11.1□□□□□ -0.63
MTCO3P40-201ENST00000392516 ZNF579Q8NAF0 562 aaKnown RBP11.1□□□□□ -0.63
MTCO3P40-201ENST00000392516 RASEFQ8IZ41 740 aa11.08□□□□□ -0.64
MTCO3P40-201ENST00000392516 TSPYL2Q9H2G4 693 aaPredicted RBP11.08□□□□□ -0.64
MTCO3P40-201ENST00000392516 NUBP1P53384 320 aa11.07□□□□□ -0.64
MTCO3P40-201ENST00000392516 KLHL34Q8N239 644 aa11.06□□□□□ -0.64
MTCO3P40-201ENST00000392516 CLCN6P51797 869 aa11.04□□□□□ -0.64
MTCO3P40-201ENST00000392516 PHF12Q96QT6 1004 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms