Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 PHF23-203ENST00000570753 410 ntTSL 29.19□□□□□ -0.942e-7■□□□□ 8.6
PRPF8Q6P2Q9 FST-205ENST00000504226 705 ntTSL 38.38□□□□□ -1.072e-7■□□□□ 8.6
PRPF8Q6P2Q9 CLUHP3-206ENST00000562354 4117 ntTSL 1 (best) BASIC6.94□□□□□ -1.32e-7■□□□□ 8.6
PRPF8Q6P2Q9 ELP2-206ENST00000535093 582 ntTSL 42.78□□□□□ -1.962e-7■□□□□ 8.6
PRPF8Q6P2Q9 SLC43A3-216ENST00000529896 494 ntTSL 412.07□□□□□ -0.481e-7■□□□□ 8.6
PRPF8Q6P2Q9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.25■□□□□ 0.352e-12■□□□□ 8.6
PRPF8Q6P2Q9 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.62e-12■□□□□ 8.6
PRPF8Q6P2Q9 RAB11FIP1-205ENST00000523182 2329 ntTSL 1 (best)11.15□□□□□ -0.622e-12■□□□□ 8.6
PRPF8Q6P2Q9 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC10.86□□□□□ -0.672e-12■□□□□ 8.6
PRPF8Q6P2Q9 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC10.41□□□□□ -0.742e-12■□□□□ 8.6
PRPF8Q6P2Q9 RAB11FIP1-204ENST00000522774 3078 ntTSL 1 (best)8.24□□□□□ -1.092e-12■□□□□ 8.6
PRPF8Q6P2Q9 MIF-203ENST00000498385 435 ntTSL 217.2■□□□□ 0.348e-9■□□□□ 8.6
PRPF8Q6P2Q9 CDHR3-212ENST00000487084 834 ntTSL 318.95■□□□□ 0.628e-9■□□□□ 8.6
PRPF8Q6P2Q9 CDHR3-210ENST00000474330 1603 ntTSL 516.56■□□□□ 0.248e-9■□□□□ 8.6
PRPF8Q6P2Q9 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.34■□□□□ 0.058e-9■□□□□ 8.6
PRPF8Q6P2Q9 MYO18A-215ENST00000533399 336 ntTSL 313.03□□□□□ -0.328e-9■□□□□ 8.6
PRPF8Q6P2Q9 METTL22-217ENST00000569597 404 ntTSL 211.67□□□□□ -0.548e-9■□□□□ 8.6
PRPF8Q6P2Q9 BMF-206ENST00000558774 671 ntTSL 3 BASIC11.19□□□□□ -0.628e-9■□□□□ 8.6
PRPF8Q6P2Q9 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.628e-9■□□□□ 8.6
PRPF8Q6P2Q9 ANKRD54-209ENST00000464849 456 ntTSL 310.81□□□□□ -0.688e-9■□□□□ 8.6
PRPF8Q6P2Q9 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.738e-9■□□□□ 8.6
PRPF8Q6P2Q9 METTL22-206ENST00000562973 586 ntTSL 29.94□□□□□ -0.828e-9■□□□□ 8.6
PRPF8Q6P2Q9 BMF-203ENST00000431415 492 ntTSL 1 (best) BASIC9.77□□□□□ -0.858e-9■□□□□ 8.6
PRPF8Q6P2Q9 BMF-210ENST00000561360 735 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.028e-9■□□□□ 8.6
PRPF8Q6P2Q9 BMF-202ENST00000397573 4545 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.058e-9■□□□□ 8.6
PRPF8Q6P2Q9 CDHR3-213ENST00000488386 540 ntTSL 34.98□□□□□ -1.618e-9■□□□□ 8.6
PRPF8Q6P2Q9 MIB2-223ENST00000508148 577 ntTSL 414.4□□□□□ -0.111e-12■□□□□ 8.6
PRPF8Q6P2Q9 GPAT4-203ENST00000519853 768 ntTSL 512.78□□□□□ -0.366e-10■□□□□ 8.6
PRPF8Q6P2Q9 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.746e-10■□□□□ 8.6
PRPF8Q6P2Q9 GPAT4-211ENST00000523906 664 ntTSL 59.78□□□□□ -0.846e-10■□□□□ 8.6
PRPF8Q6P2Q9 GPAT4-210ENST00000521806 873 ntTSL 59.09□□□□□ -0.956e-10■□□□□ 8.6
PRPF8Q6P2Q9 GPAT4-204ENST00000519921 997 ntTSL 58.98□□□□□ -0.976e-10■□□□□ 8.6
PRPF8Q6P2Q9 TMEM9-211ENST00000497582 1075 ntTSL 319.51■□□□□ 0.715e-6■□□□□ 8.6
PRPF8Q6P2Q9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.675e-6■□□□□ 8.6
PRPF8Q6P2Q9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.385e-6■□□□□ 8.6
PRPF8Q6P2Q9 TMEM9-206ENST00000435310 507 ntTSL 214.45□□□□□ -0.15e-6■□□□□ 8.6
PRPF8Q6P2Q9 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.435e-6■□□□□ 8.6
PRPF8Q6P2Q9 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.545e-6■□□□□ 8.6
PRPF8Q6P2Q9 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.545e-6■□□□□ 8.6
PRPF8Q6P2Q9 TMEM9-205ENST00000414605 545 ntTSL 29.47□□□□□ -0.895e-6■□□□□ 8.6
PRPF8Q6P2Q9 SLC12A4-205ENST00000570616 406 ntTSL 319.15■□□□□ 0.663e-35■□□□□ 8.6
PRPF8Q6P2Q9 LMO2-204ENST00000464025 1550 ntTSL 1 (best)13.49□□□□□ -0.253e-6■□□□□ 8.6
PRPF8Q6P2Q9 PI4KAP2-208ENST00000477296 1787 ntTSL 212.92□□□□□ -0.343e-6■□□□□ 8.6
PRPF8Q6P2Q9 PI4KAP2-206ENST00000470274 2414 ntTSL 212.44□□□□□ -0.423e-6■□□□□ 8.6
PRPF8Q6P2Q9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.583e-6■□□□□ 8.6
PRPF8Q6P2Q9 PI4KAP2-204ENST00000463608 2816 ntTSL 511.07□□□□□ -0.643e-6■□□□□ 8.6
PRPF8Q6P2Q9 SCAP-210ENST00000468965 570 ntTSL 210.98□□□□□ -0.652e-6■□□□□ 8.6
PRPF8Q6P2Q9 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC9.76□□□□□ -0.853e-6■□□□□ 8.6
PRPF8Q6P2Q9 NEK7-206ENST00000493790 1021 ntTSL 26.16□□□□□ -1.423e-6■□□□□ 8.6
PRPF8Q6P2Q9 PICALM-206ENST00000526907 737 ntTSL 5-0.63□□□□□ -2.514e-11■□□□□ 8.6
PRPF8Q6P2Q9 MED12-207ENST00000462984 631 ntTSL 28.92□□□□□ -0.982e-7■□□□□ 8.5
PRPF8Q6P2Q9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.49■■□□□ 1.031e-6■□□□□ 8.5
PRPF8Q6P2Q9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.18■□□□□ 0.821e-6■□□□□ 8.5
PRPF8Q6P2Q9 STRADB-209ENST00000488196 424 ntTSL 319.91■□□□□ 0.781e-6■□□□□ 8.5
PRPF8Q6P2Q9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.711e-6■□□□□ 8.5
PRPF8Q6P2Q9 LINC02210-202ENST00000455565 2609 ntTSL 1 (best)18.4■□□□□ 0.541e-6■□□□□ 8.5
PRPF8Q6P2Q9 OXSR1-206ENST00000492714 471 ntTSL 318.14■□□□□ 0.491e-6■□□□□ 8.5
PRPF8Q6P2Q9 SPATA5L1-207ENST00000559860 2023 ntTSL 217.92■□□□□ 0.461e-6■□□□□ 8.5
PRPF8Q6P2Q9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.381e-6■□□□□ 8.5
PRPF8Q6P2Q9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.281e-6■□□□□ 8.5
PRPF8Q6P2Q9 C19orf66-203ENST00000585919 2079 ntTSL 216.71■□□□□ 0.271e-6■□□□□ 8.5
PRPF8Q6P2Q9 C19orf66-207ENST00000587710 808 ntTSL 516.01■□□□□ 0.151e-6■□□□□ 8.5
PRPF8Q6P2Q9 SPATA5L1-204ENST00000531970 2464 ntTSL 215.67■□□□□ 0.11e-6■□□□□ 8.5
PRPF8Q6P2Q9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.11e-6■□□□□ 8.5
PRPF8Q6P2Q9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.091e-6■□□□□ 8.5
PRPF8Q6P2Q9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.51■□□□□ 0.071e-6■□□□□ 8.5
PRPF8Q6P2Q9 C19orf66-211ENST00000593131 565 ntTSL 315.43■□□□□ 0.061e-6■□□□□ 8.5
PRPF8Q6P2Q9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.051e-6■□□□□ 8.5
PRPF8Q6P2Q9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.34■□□□□ 0.052e-11■□□□□ 8.5
PRPF8Q6P2Q9 GIPC1-204ENST00000585606 2071 ntTSL 214.88□□□□□ -0.031e-6■□□□□ 8.5
PRPF8Q6P2Q9 STK32C-206ENST00000462160 1866 ntTSL 214.66□□□□□ -0.061e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-210ENST00000419063 835 ntTSL 314□□□□□ -0.171e-6■□□□□ 8.5
PRPF8Q6P2Q9 DDX42-212ENST00000581135 589 ntTSL 413.68□□□□□ -0.222e-11■□□□□ 8.5
PRPF8Q6P2Q9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.51□□□□□ -0.251e-6■□□□□ 8.5
PRPF8Q6P2Q9 MCRS1-214ENST00000552206 984 ntTSL 313.38□□□□□ -0.271e-6■□□□□ 8.5
PRPF8Q6P2Q9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.28□□□□□ -0.282e-11■□□□□ 8.5
PRPF8Q6P2Q9 C19orf47-201ENST00000357884 1774 ntTSL 513.21□□□□□ -0.31e-6■□□□□ 8.5
PRPF8Q6P2Q9 C19orf47-205ENST00000580977 563 ntTSL 412.95□□□□□ -0.341e-6■□□□□ 8.5
PRPF8Q6P2Q9 RBPMS-220ENST00000523717 886 ntTSL 312.77□□□□□ -0.361e-6■□□□□ 8.5
PRPF8Q6P2Q9 ANKS3-216ENST00000590689 834 ntTSL 212.67□□□□□ -0.381e-6■□□□□ 8.5
PRPF8Q6P2Q9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.392e-11■□□□□ 8.5
PRPF8Q6P2Q9 EIF4E2-211ENST00000463074 252 ntTSL 212.54□□□□□ -0.41e-6■□□□□ 8.5
PRPF8Q6P2Q9 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.441e-6■□□□□ 8.5
PRPF8Q6P2Q9 PLIN3-203ENST00000587462 604 ntTSL 412.15□□□□□ -0.461e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-261ENST00000493709 715 ntTSL 312.09□□□□□ -0.471e-6■□□□□ 8.5
PRPF8Q6P2Q9 GALNS-203ENST00000562593 5682 ntTSL 1 (best)12.08□□□□□ -0.481e-6■□□□□ 8.5
PRPF8Q6P2Q9 NIT1-209ENST00000479266 567 ntTSL 312.08□□□□□ -0.481e-6■□□□□ 8.5
PRPF8Q6P2Q9 NIT1-212ENST00000486962 550 ntTSL 311.94□□□□□ -0.51e-6■□□□□ 8.5
PRPF8Q6P2Q9 MCRS1-210ENST00000549528 646 ntTSL 311.7□□□□□ -0.541e-6■□□□□ 8.5
PRPF8Q6P2Q9 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC11.55□□□□□ -0.561e-6■□□□□ 8.5
PRPF8Q6P2Q9 PGM3-213ENST00000515333 575 ntTSL 211.23□□□□□ -0.611e-6■□□□□ 8.5
PRPF8Q6P2Q9 PGM3-202ENST00000503094 558 ntTSL 411.2□□□□□ -0.621e-6■□□□□ 8.5
PRPF8Q6P2Q9 NIT1-208ENST00000478277 370 ntTSL 311.02□□□□□ -0.651e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-242ENST00000463104 567 ntTSL 510.95□□□□□ -0.661e-6■□□□□ 8.5
PRPF8Q6P2Q9 SORBS2-250ENST00000478249 594 ntTSL 510.9□□□□□ -0.671e-6■□□□□ 8.5
PRPF8Q6P2Q9 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC10.8□□□□□ -0.681e-6■□□□□ 8.5
PRPF8Q6P2Q9 MYO1C-207ENST00000571615 553 ntTSL 410.79□□□□□ -0.681e-6■□□□□ 8.5
PRPF8Q6P2Q9 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.691e-6■□□□□ 8.5
PRPF8Q6P2Q9 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71e-6■□□□□ 8.5
PRPF8Q6P2Q9 PGM3-208ENST00000508748 640 ntTSL 510.54□□□□□ -0.721e-6■□□□□ 8.5
Retrieved 100 of 73,762 protein–RNA pairs in 2918 ms