Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL390119.1-201ENST00000440329 312 ntBASIC10.14□□□□□ -0.79
IFT140Q96RY7 AL645937.3-201ENST00000453647 936 ntBASIC10.14□□□□□ -0.79
IFT140Q96RY7 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC10.14□□□□□ -0.79
IFT140Q96RY7 AL355032.1-201ENST00000472981 438 ntBASIC10.14□□□□□ -0.79
IFT140Q96RY7 RN7SL222P-201ENST00000476452 299 ntBASIC10.14□□□□□ -0.79
IFT140Q96RY7 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC10.14□□□□□ -0.79
IFT140Q96RY7 RNU6-615P-201ENST00000516065 106 ntBASIC10.14□□□□□ -0.79
IFT140Q96RY7 SNORA43.3-201ENST00000517240 103 ntBASIC10.14□□□□□ -0.79
IFT140Q96RY7 DCN-209ENST00000546745 1026 ntTSL 3 BASIC10.14□□□□□ -0.79
IFT140Q96RY7 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC10.14□□□□□ -0.79
IFT140Q96RY7 IGBP1P1-201ENST00000554337 1009 ntBASIC10.14□□□□□ -0.79
IFT140Q96RY7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC10.14□□□□□ -0.79
IFT140Q96RY7 ATM-229ENST00000639953 587 ntTSL 5 BASIC10.14□□□□□ -0.79
IFT140Q96RY7 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
IFT140Q96RY7 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
IFT140Q96RY7 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
IFT140Q96RY7 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
IFT140Q96RY7 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
IFT140Q96RY7 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
IFT140Q96RY7 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 RN7SL808P-201ENST00000496066 299 ntBASIC10.13□□□□□ -0.79
IFT140Q96RY7 SSX8-201ENST00000506270 579 ntBASIC10.13□□□□□ -0.79
IFT140Q96RY7 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 AP002884.5-201ENST00000595053 1132 ntBASIC10.13□□□□□ -0.79
IFT140Q96RY7 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 AC007683.2-201ENST00000624681 714 ntBASIC10.13□□□□□ -0.79
IFT140Q96RY7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
IFT140Q96RY7 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
IFT140Q96RY7 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC10.13□□□□□ -0.79
IFT140Q96RY7 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
IFT140Q96RY7 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC10.12□□□□□ -0.79
IFT140Q96RY7 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
IFT140Q96RY7 MIR550A3-201ENST00000390735 95 ntBASIC10.12□□□□□ -0.79
IFT140Q96RY7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
IFT140Q96RY7 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC10.12□□□□□ -0.79
IFT140Q96RY7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC10.12□□□□□ -0.79
IFT140Q96RY7 FTH1P2-201ENST00000466086 412 ntBASIC10.12□□□□□ -0.79
IFT140Q96RY7 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC10.12□□□□□ -0.79
IFT140Q96RY7 AL139407.1-201ENST00000613826 1175 ntBASIC10.12□□□□□ -0.79
IFT140Q96RY7 AL137067.2-201ENST00000621202 131 ntBASIC10.12□□□□□ -0.79
IFT140Q96RY7 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
IFT140Q96RY7 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
IFT140Q96RY7 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
IFT140Q96RY7 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
IFT140Q96RY7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
IFT140Q96RY7 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
IFT140Q96RY7 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
IFT140Q96RY7 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
IFT140Q96RY7 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
IFT140Q96RY7 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
IFT140Q96RY7 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC10.12□□□□□ -0.79
IFT140Q96RY7 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC10.12□□□□□ -0.79
IFT140Q96RY7 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
IFT140Q96RY7 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
IFT140Q96RY7 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC10.12□□□□□ -0.79
IFT140Q96RY7 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC10.11□□□□□ -0.79
IFT140Q96RY7 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
IFT140Q96RY7 RN7SKP103-201ENST00000363848 320 ntBASIC10.11□□□□□ -0.79
IFT140Q96RY7 RPL36P18-201ENST00000419316 318 ntBASIC10.11□□□□□ -0.79
IFT140Q96RY7 CBX1P2-201ENST00000453841 458 ntBASIC10.11□□□□□ -0.79
IFT140Q96RY7 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC10.11□□□□□ -0.79
IFT140Q96RY7 RPL35AP19-201ENST00000469425 329 ntBASIC10.11□□□□□ -0.79
IFT140Q96RY7 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
IFT140Q96RY7 AC004453.1-201ENST00000487895 408 ntBASIC10.11□□□□□ -0.79
IFT140Q96RY7 OR7E157P-201ENST00000494376 911 ntBASIC10.11□□□□□ -0.79
IFT140Q96RY7 RNA5SP228-201ENST00000516232 133 ntBASIC10.11□□□□□ -0.79
IFT140Q96RY7 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC10.11□□□□□ -0.79
IFT140Q96RY7 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC10.11□□□□□ -0.79
IFT140Q96RY7 RN7SL708P-201ENST00000580952 299 ntBASIC10.11□□□□□ -0.79
IFT140Q96RY7 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC10.11□□□□□ -0.79
IFT140Q96RY7 AL359704.2-201ENST00000604335 521 ntBASIC10.11□□□□□ -0.79
IFT140Q96RY7 AL049539.1-201ENST00000611964 459 ntBASIC10.11□□□□□ -0.79
IFT140Q96RY7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC10.11□□□□□ -0.79
IFT140Q96RY7 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC10.11□□□□□ -0.79
IFT140Q96RY7 AC016583.1-201ENST00000624221 2431 ntBASIC10.11□□□□□ -0.79
IFT140Q96RY7 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
IFT140Q96RY7 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
IFT140Q96RY7 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
IFT140Q96RY7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
IFT140Q96RY7 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC10.11□□□□□ -0.79
IFT140Q96RY7 MIR541-201ENST00000401360 84 ntBASIC10.1□□□□□ -0.79
IFT140Q96RY7 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 RN7SL172P-201ENST00000460535 303 ntBASIC10.1□□□□□ -0.79
IFT140Q96RY7 RN7SL583P-201ENST00000475692 287 ntBASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms