Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 PTBP1P-201ENST00000554374 1601 ntBASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 AL031963.3-201ENST00000606441 850 ntBASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 CR392000.1-201ENST00000624770 1228 ntBASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 AL157384.1-201ENST00000445995 2473 ntBASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 ARMC10P1-201ENST00000313754 855 ntBASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 AC005521.1-201ENST00000393351 872 ntBASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 AL049597.2-201ENST00000565575 961 ntBASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX11Q9Y5W9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 LINC01568-207ENST00000641790 1380 ntBASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 AL390955.1-201ENST00000428694 934 ntBASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SNX11Q9Y5W9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX11Q9Y5W9 KRT8P20-201ENST00000423953 1409 ntBASIC19.59■□□□□ 0.73
SNX11Q9Y5W9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SNX11Q9Y5W9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX11Q9Y5W9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.59■□□□□ 0.73
SNX11Q9Y5W9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SNX11Q9Y5W9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SNX11Q9Y5W9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX11Q9Y5W9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX11Q9Y5W9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX11Q9Y5W9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX11Q9Y5W9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX11Q9Y5W9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms