Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NOD1Q9Y239 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.86■■□□□ 1.09
NOD1Q9Y239 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NOD1Q9Y239 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
NOD1Q9Y239 AC005229.4-201ENST00000610085 2198 ntBASIC21.86■■□□□ 1.09
NOD1Q9Y239 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
NOD1Q9Y239 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NOD1Q9Y239 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NOD1Q9Y239 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NOD1Q9Y239 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
NOD1Q9Y239 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NOD1Q9Y239 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NOD1Q9Y239 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
NOD1Q9Y239 FEM1AP4-201ENST00000443167 1987 ntBASIC21.85■■□□□ 1.09
NOD1Q9Y239 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NOD1Q9Y239 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NOD1Q9Y239 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NOD1Q9Y239 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
NOD1Q9Y239 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NOD1Q9Y239 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
NOD1Q9Y239 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NOD1Q9Y239 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.85■■□□□ 1.09
NOD1Q9Y239 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NOD1Q9Y239 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NOD1Q9Y239 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.85■■□□□ 1.09
NOD1Q9Y239 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NOD1Q9Y239 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NOD1Q9Y239 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
NOD1Q9Y239 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.85■■□□□ 1.09
NOD1Q9Y239 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NOD1Q9Y239 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NOD1Q9Y239 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.84■■□□□ 1.09
NOD1Q9Y239 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.84■■□□□ 1.09
NOD1Q9Y239 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NOD1Q9Y239 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NOD1Q9Y239 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.84■■□□□ 1.09
NOD1Q9Y239 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.84■■□□□ 1.09
NOD1Q9Y239 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NOD1Q9Y239 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.84■■□□□ 1.09
NOD1Q9Y239 YBX1P10-201ENST00000444752 975 ntBASIC21.84■■□□□ 1.09
NOD1Q9Y239 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NOD1Q9Y239 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NOD1Q9Y239 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.84■■□□□ 1.09
NOD1Q9Y239 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.84■■□□□ 1.09
NOD1Q9Y239 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NOD1Q9Y239 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
NOD1Q9Y239 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NOD1Q9Y239 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NOD1Q9Y239 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.84■■□□□ 1.09
NOD1Q9Y239 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NOD1Q9Y239 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.83■■□□□ 1.09
NOD1Q9Y239 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NOD1Q9Y239 AC116351.2-201ENST00000606540 1585 ntBASIC21.83■■□□□ 1.09
NOD1Q9Y239 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NOD1Q9Y239 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NOD1Q9Y239 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.83■■□□□ 1.09
NOD1Q9Y239 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NOD1Q9Y239 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NOD1Q9Y239 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.83■■□□□ 1.09
NOD1Q9Y239 TUBB8P6-201ENST00000436895 1288 ntBASIC21.83■■□□□ 1.09
NOD1Q9Y239 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.83■■□□□ 1.09
NOD1Q9Y239 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
NOD1Q9Y239 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
NOD1Q9Y239 DGCR10-201ENST00000609839 495 ntBASIC21.83■■□□□ 1.09
NOD1Q9Y239 AC131212.4-201ENST00000623606 975 ntBASIC21.83■■□□□ 1.09
NOD1Q9Y239 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NOD1Q9Y239 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NOD1Q9Y239 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NOD1Q9Y239 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.83■■□□□ 1.08
NOD1Q9Y239 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.83■■□□□ 1.08
NOD1Q9Y239 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.83■■□□□ 1.08
NOD1Q9Y239 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NOD1Q9Y239 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
NOD1Q9Y239 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
NOD1Q9Y239 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.83■■□□□ 1.08
NOD1Q9Y239 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NOD1Q9Y239 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
NOD1Q9Y239 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NOD1Q9Y239 CRYGFP-201ENST00000418459 633 ntBASIC21.82■■□□□ 1.08
NOD1Q9Y239 B3GAT3P1-201ENST00000471720 806 ntBASIC21.82■■□□□ 1.08
NOD1Q9Y239 DUX4L26-201ENST00000489078 1255 ntBASIC21.82■■□□□ 1.08
NOD1Q9Y239 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.82■■□□□ 1.08
NOD1Q9Y239 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NOD1Q9Y239 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NOD1Q9Y239 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NOD1Q9Y239 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
NOD1Q9Y239 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NOD1Q9Y239 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NOD1Q9Y239 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.82■■□□□ 1.08
NOD1Q9Y239 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NOD1Q9Y239 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
NOD1Q9Y239 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NOD1Q9Y239 AC073508.3-201ENST00000619697 1419 ntBASIC21.81■■□□□ 1.08
NOD1Q9Y239 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.81■■□□□ 1.08
NOD1Q9Y239 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NOD1Q9Y239 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.81■■□□□ 1.08
NOD1Q9Y239 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NOD1Q9Y239 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NOD1Q9Y239 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NOD1Q9Y239 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms