Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 AL162412.1-201ENST00000567129 965 ntBASIC17.61■□□□□ 0.41
COPS3Q9UNS2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 AC138932.1-201ENST00000534164 6830 ntBASIC17.61■□□□□ 0.41
COPS3Q9UNS2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS3Q9UNS2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 AC013268.1-206ENST00000638368 961 ntBASIC17.6■□□□□ 0.41
COPS3Q9UNS2 AC112229.1-201ENST00000639295 961 ntBASIC17.6■□□□□ 0.41
COPS3Q9UNS2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS3Q9UNS2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.59■□□□□ 0.41
COPS3Q9UNS2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 AC004408.2-201ENST00000623613 2777 ntBASIC17.59■□□□□ 0.41
COPS3Q9UNS2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.59■□□□□ 0.41
COPS3Q9UNS2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.58■□□□□ 0.41
COPS3Q9UNS2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COPS3Q9UNS2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 AL031963.3-201ENST00000606441 850 ntBASIC17.58■□□□□ 0.4
COPS3Q9UNS2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms