Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHGC3Q9UN70 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGC3Q9UN70 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDHGC3Q9UN70 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
PCDHGC3Q9UN70 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 AC008403.3-201ENST00000598924 454 ntBASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PCDHGC3Q9UN70 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 RNA5SP413-201ENST00000516373 109 ntBASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 AL121906.2-201ENST00000621597 723 ntBASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
PCDHGC3Q9UN70 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 AL121829.2-201ENST00000620908 328 ntBASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGC3Q9UN70 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGC3Q9UN70 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGC3Q9UN70 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGC3Q9UN70 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGC3Q9UN70 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGC3Q9UN70 POM121L13P-201ENST00000422362 380 ntBASIC20.89■□□□□ 0.93
PCDHGC3Q9UN70 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHGC3Q9UN70 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGC3Q9UN70 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGC3Q9UN70 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHGC3Q9UN70 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
PCDHGC3Q9UN70 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGC3Q9UN70 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms