Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CHCHD3Q9NX63 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.36■□□□□ 0.53
CHCHD3Q9NX63 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CHCHD3Q9NX63 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHCHD3Q9NX63 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.36■□□□□ 0.53
CHCHD3Q9NX63 AC124067.4-201ENST00000519691 2379 ntBASIC18.36■□□□□ 0.53
CHCHD3Q9NX63 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.36■□□□□ 0.53
CHCHD3Q9NX63 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.36■□□□□ 0.53
CHCHD3Q9NX63 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.36■□□□□ 0.53
CHCHD3Q9NX63 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.36■□□□□ 0.53
CHCHD3Q9NX63 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHCHD3Q9NX63 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHCHD3Q9NX63 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.36■□□□□ 0.53
CHCHD3Q9NX63 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CHCHD3Q9NX63 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 AC018470.1-201ENST00000624790 3129 ntBASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHCHD3Q9NX63 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD3Q9NX63 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHCHD3Q9NX63 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
CHCHD3Q9NX63 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
CHCHD3Q9NX63 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHCHD3Q9NX63 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CHCHD3Q9NX63 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHCHD3Q9NX63 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHCHD3Q9NX63 AC055733.4-201ENST00000638462 1354 ntBASIC18.33■□□□□ 0.53
CHCHD3Q9NX63 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHCHD3Q9NX63 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHCHD3Q9NX63 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CHCHD3Q9NX63 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHCHD3Q9NX63 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.33■□□□□ 0.53
CHCHD3Q9NX63 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 PKD1P1-201ENST00000458669 6805 ntBASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CHCHD3Q9NX63 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.32■□□□□ 0.52
CHCHD3Q9NX63 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms