Protein–RNA interactions for Protein: Q9NRS6

SNX15, Sorting nexin-15, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15Q9NRS6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 HLA-G-202ENST00000376815 851 ntBASIC19.68■□□□□ 0.74
SNX15Q9NRS6 HLA-G-203ENST00000376818 1127 ntBASIC19.68■□□□□ 0.74
SNX15Q9NRS6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 AC069236.1-201ENST00000604339 616 ntBASIC19.68■□□□□ 0.74
SNX15Q9NRS6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX15Q9NRS6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 AL162430.1-201ENST00000480705 870 ntBASIC19.67■□□□□ 0.74
SNX15Q9NRS6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX15Q9NRS6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 PHGDH-210ENST00000641115 1638 ntBASIC19.66■□□□□ 0.74
SNX15Q9NRS6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.66■□□□□ 0.74
SNX15Q9NRS6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 AC008694.1-202ENST00000636953 945 ntBASIC19.66■□□□□ 0.74
SNX15Q9NRS6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.66■□□□□ 0.74
SNX15Q9NRS6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX15Q9NRS6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX15Q9NRS6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms