Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GDF3Q9NR23 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GDF3Q9NR23 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDF3Q9NR23 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.86■□□□□ 0.93
GDF3Q9NR23 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDF3Q9NR23 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GDF3Q9NR23 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDF3Q9NR23 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GDF3Q9NR23 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDF3Q9NR23 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
GDF3Q9NR23 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
GDF3Q9NR23 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GDF3Q9NR23 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.86■□□□□ 0.93
GDF3Q9NR23 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDF3Q9NR23 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.86■□□□□ 0.93
GDF3Q9NR23 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GDF3Q9NR23 KRT8P36-201ENST00000489121 1440 ntBASIC20.86■□□□□ 0.93
GDF3Q9NR23 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
GDF3Q9NR23 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
GDF3Q9NR23 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDF3Q9NR23 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
GDF3Q9NR23 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GDF3Q9NR23 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDF3Q9NR23 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDF3Q9NR23 AC245052.3-201ENST00000450182 901 ntBASIC20.85■□□□□ 0.93
GDF3Q9NR23 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GDF3Q9NR23 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GDF3Q9NR23 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.85■□□□□ 0.93
GDF3Q9NR23 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
GDF3Q9NR23 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.85■□□□□ 0.93
GDF3Q9NR23 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDF3Q9NR23 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDF3Q9NR23 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GDF3Q9NR23 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
GDF3Q9NR23 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF3Q9NR23 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF3Q9NR23 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
GDF3Q9NR23 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF3Q9NR23 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.84■□□□□ 0.93
GDF3Q9NR23 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF3Q9NR23 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.84■□□□□ 0.93
GDF3Q9NR23 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.84■□□□□ 0.93
GDF3Q9NR23 AL512625.2-201ENST00000417533 625 ntBASIC20.84■□□□□ 0.93
GDF3Q9NR23 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.84■□□□□ 0.93
GDF3Q9NR23 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.84■□□□□ 0.93
GDF3Q9NR23 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.84■□□□□ 0.93
GDF3Q9NR23 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.84■□□□□ 0.93
GDF3Q9NR23 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.84■□□□□ 0.93
GDF3Q9NR23 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.84■□□□□ 0.93
GDF3Q9NR23 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF3Q9NR23 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GDF3Q9NR23 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.84■□□□□ 0.93
GDF3Q9NR23 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF3Q9NR23 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
GDF3Q9NR23 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.84■□□□□ 0.93
GDF3Q9NR23 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF3Q9NR23 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF3Q9NR23 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GDF3Q9NR23 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GDF3Q9NR23 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GDF3Q9NR23 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.83■□□□□ 0.93
GDF3Q9NR23 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.83■□□□□ 0.93
GDF3Q9NR23 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GDF3Q9NR23 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
GDF3Q9NR23 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.83■□□□□ 0.93
GDF3Q9NR23 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
GDF3Q9NR23 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
GDF3Q9NR23 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GDF3Q9NR23 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
GDF3Q9NR23 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.83■□□□□ 0.93
GDF3Q9NR23 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.83■□□□□ 0.93
GDF3Q9NR23 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GDF3Q9NR23 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.93
GDF3Q9NR23 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
GDF3Q9NR23 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.83■□□□□ 0.93
GDF3Q9NR23 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.83■□□□□ 0.93
GDF3Q9NR23 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.83■□□□□ 0.93
GDF3Q9NR23 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.83■□□□□ 0.93
GDF3Q9NR23 AC016405.3-201ENST00000607710 860 ntBASIC20.83■□□□□ 0.93
GDF3Q9NR23 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GDF3Q9NR23 AC066615.1-201ENST00000640911 628 ntBASIC20.83■□□□□ 0.93
GDF3Q9NR23 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.83■□□□□ 0.93
GDF3Q9NR23 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
GDF3Q9NR23 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
GDF3Q9NR23 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GDF3Q9NR23 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.83■□□□□ 0.92
GDF3Q9NR23 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GDF3Q9NR23 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GDF3Q9NR23 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
GDF3Q9NR23 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GDF3Q9NR23 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GDF3Q9NR23 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
GDF3Q9NR23 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GDF3Q9NR23 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.82■□□□□ 0.92
GDF3Q9NR23 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GDF3Q9NR23 KRT16P2-201ENST00000414673 1423 ntBASIC20.82■□□□□ 0.92
GDF3Q9NR23 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
GDF3Q9NR23 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
GDF3Q9NR23 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.82■□□□□ 0.92
GDF3Q9NR23 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms