Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
C12orf4Q9NQ89 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C12orf4Q9NQ89 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 TCF3P1-201ENST00000423021 1937 ntBASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 DUX4L2-201ENST00000561772 1275 ntBASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 DUX4L6-201ENST00000626483 1275 ntBASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 DUX4L1-201ENST00000627662 1275 ntBASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 DUX4L8-201ENST00000629013 1275 ntBASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 DUX4L3-201ENST00000630187 1275 ntBASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 DUX4L7-201ENST00000630678 1275 ntBASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 DUX4L5-201ENST00000630834 1275 ntBASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 MIR2861-201ENST00000636310 90 ntBASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
C12orf4Q9NQ89 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 IRS3P-201ENST00000223076 1006 ntBASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 AC142381.2-201ENST00000566120 298 ntBASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf4Q9NQ89 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms