Protein–RNA interactions for Protein: Q9NPG3

UBN1, Ubinuclein-1, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBN1Q9NPG3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
UBN1Q9NPG3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UBN1Q9NPG3 HTR7P1-201ENST00000538670 1336 ntBASIC21.58■■□□□ 1.05
UBN1Q9NPG3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBN1Q9NPG3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
UBN1Q9NPG3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
UBN1Q9NPG3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBN1Q9NPG3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UBN1Q9NPG3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBN1Q9NPG3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
UBN1Q9NPG3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBN1Q9NPG3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBN1Q9NPG3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UBN1Q9NPG3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.58■■□□□ 1.05
UBN1Q9NPG3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.58■■□□□ 1.05
UBN1Q9NPG3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBN1Q9NPG3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.58■■□□□ 1.04
UBN1Q9NPG3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
UBN1Q9NPG3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBN1Q9NPG3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
UBN1Q9NPG3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBN1Q9NPG3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 AF186192.3-201ENST00000583427 947 ntBASIC21.57■■□□□ 1.04
UBN1Q9NPG3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.57■■□□□ 1.04
UBN1Q9NPG3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 REXO1L12P-201ENST00000622156 912 ntBASIC21.56■■□□□ 1.04
UBN1Q9NPG3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 DPP3P2-201ENST00000416030 1696 ntBASIC21.56■■□□□ 1.04
UBN1Q9NPG3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.56■■□□□ 1.04
UBN1Q9NPG3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.55■■□□□ 1.04
UBN1Q9NPG3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.55■■□□□ 1.04
UBN1Q9NPG3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.55■■□□□ 1.04
UBN1Q9NPG3 KRT16P6-202ENST00000425692 1426 ntBASIC21.55■■□□□ 1.04
UBN1Q9NPG3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
UBN1Q9NPG3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBN1Q9NPG3 AC092720.2-201ENST00000602388 1665 ntBASIC21.54■■□□□ 1.04
UBN1Q9NPG3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBN1Q9NPG3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.54■■□□□ 1.04
UBN1Q9NPG3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBN1Q9NPG3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
UBN1Q9NPG3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBN1Q9NPG3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
UBN1Q9NPG3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.54■■□□□ 1.04
UBN1Q9NPG3 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.54■■□□□ 1.04
UBN1Q9NPG3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms