Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.11■□□□□ 0.65
CPNE5Q9HCH3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 AC005363.2-201ENST00000618631 242 ntBASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CPNE5Q9HCH3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE5Q9HCH3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CPNE5Q9HCH3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE5Q9HCH3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE5Q9HCH3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE5Q9HCH3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE5Q9HCH3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE5Q9HCH3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE5Q9HCH3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE5Q9HCH3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.08■□□□□ 0.64
CPNE5Q9HCH3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
CPNE5Q9HCH3 AC005521.1-201ENST00000393351 872 ntBASIC19.08■□□□□ 0.64
CPNE5Q9HCH3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE5Q9HCH3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.08■□□□□ 0.64
CPNE5Q9HCH3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE5Q9HCH3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE5Q9HCH3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE5Q9HCH3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE5Q9HCH3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.08■□□□□ 0.64
CPNE5Q9HCH3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE5Q9HCH3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms