Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.55■□□□□ 0.72
POLR1BQ9H9Y6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 AC120498.8-201ENST00000614275 531 ntBASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 AC116050.2-201ENST00000612102 1779 ntBASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
POLR1BQ9H9Y6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 AC110285.5-201ENST00000611501 352 ntBASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR1BQ9H9Y6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 AC133561.5-201ENST00000635547 218 ntBASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
POLR1BQ9H9Y6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
POLR1BQ9H9Y6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.52■□□□□ 0.71
POLR1BQ9H9Y6 GABARAPL3-202ENST00000624044 1851 ntBASIC19.52■□□□□ 0.71
POLR1BQ9H9Y6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
POLR1BQ9H9Y6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR1BQ9H9Y6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms