Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNF1Q9H3M0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
KCNF1Q9H3M0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KCNF1Q9H3M0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
KCNF1Q9H3M0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KCNF1Q9H3M0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNF1Q9H3M0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNF1Q9H3M0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KCNF1Q9H3M0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 PTBP1P-201ENST00000554374 1601 ntBASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 NOC2LP2-201ENST00000407594 1944 ntBASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 AL354751.1-201ENST00000412768 1863 ntBASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 BICD1-207ENST00000551848 1962 ntBASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.59■■□□□ 1.05
KCNF1Q9H3M0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
KCNF1Q9H3M0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KCNF1Q9H3M0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KCNF1Q9H3M0 FZD10-202ENST00000539839 3282 ntBASIC21.58■■□□□ 1.05
KCNF1Q9H3M0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KCNF1Q9H3M0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
KCNF1Q9H3M0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.58■■□□□ 1.05
KCNF1Q9H3M0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KCNF1Q9H3M0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KCNF1Q9H3M0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KCNF1Q9H3M0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
KCNF1Q9H3M0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.58■■□□□ 1.05
KCNF1Q9H3M0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
KCNF1Q9H3M0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
KCNF1Q9H3M0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KCNF1Q9H3M0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
KCNF1Q9H3M0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
KCNF1Q9H3M0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.58■■□□□ 1.04
KCNF1Q9H3M0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.58■■□□□ 1.04
KCNF1Q9H3M0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KCNF1Q9H3M0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 SLC7A5P2-201ENST00000553010 536 ntBASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.57■■□□□ 1.04
KCNF1Q9H3M0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNF1Q9H3M0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms