Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.85■□□□□ 0.61
VCX3BQ9H321 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.85■□□□□ 0.61
VCX3BQ9H321 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 AC006455.2-201ENST00000429931 906 ntBASIC18.85■□□□□ 0.61
VCX3BQ9H321 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.85■□□□□ 0.61
VCX3BQ9H321 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.85■□□□□ 0.61
VCX3BQ9H321 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
VCX3BQ9H321 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.85■□□□□ 0.61
VCX3BQ9H321 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
VCX3BQ9H321 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
VCX3BQ9H321 AL133373.2-201ENST00000623187 2828 ntBASIC18.85■□□□□ 0.61
VCX3BQ9H321 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
VCX3BQ9H321 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCX3BQ9H321 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3BQ9H321 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3BQ9H321 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VCX3BQ9H321 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.84■□□□□ 0.61
VCX3BQ9H321 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
VCX3BQ9H321 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3BQ9H321 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3BQ9H321 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.84■□□□□ 0.61
VCX3BQ9H321 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.84■□□□□ 0.61
VCX3BQ9H321 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.84■□□□□ 0.61
VCX3BQ9H321 MIR2861-201ENST00000636310 90 ntBASIC18.84■□□□□ 0.61
VCX3BQ9H321 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3BQ9H321 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3BQ9H321 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.84■□□□□ 0.61
VCX3BQ9H321 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.84■□□□□ 0.61
VCX3BQ9H321 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.84■□□□□ 0.61
VCX3BQ9H321 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3BQ9H321 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3BQ9H321 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
VCX3BQ9H321 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3BQ9H321 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VCX3BQ9H321 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VCX3BQ9H321 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
VCX3BQ9H321 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.83■□□□□ 0.61
VCX3BQ9H321 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.83■□□□□ 0.61
VCX3BQ9H321 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCX3BQ9H321 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VCX3BQ9H321 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCX3BQ9H321 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.83■□□□□ 0.61
VCX3BQ9H321 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.83■□□□□ 0.61
VCX3BQ9H321 BX664725.1-201ENST00000438252 379 ntBASIC18.83■□□□□ 0.6
VCX3BQ9H321 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.83■□□□□ 0.6
VCX3BQ9H321 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.83■□□□□ 0.6
VCX3BQ9H321 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCX3BQ9H321 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCX3BQ9H321 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.83■□□□□ 0.6
VCX3BQ9H321 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCX3BQ9H321 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
VCX3BQ9H321 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.83■□□□□ 0.6
VCX3BQ9H321 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCX3BQ9H321 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.83■□□□□ 0.6
VCX3BQ9H321 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCX3BQ9H321 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCX3BQ9H321 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.83■□□□□ 0.6
VCX3BQ9H321 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCX3BQ9H321 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.82■□□□□ 0.6
VCX3BQ9H321 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCX3BQ9H321 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.82■□□□□ 0.6
VCX3BQ9H321 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
VCX3BQ9H321 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCX3BQ9H321 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCX3BQ9H321 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VCX3BQ9H321 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.82■□□□□ 0.6
VCX3BQ9H321 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
VCX3BQ9H321 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VCX3BQ9H321 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.82■□□□□ 0.6
VCX3BQ9H321 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.82■□□□□ 0.6
VCX3BQ9H321 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCX3BQ9H321 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
VCX3BQ9H321 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.82■□□□□ 0.6
VCX3BQ9H321 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.82■□□□□ 0.6
VCX3BQ9H321 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCX3BQ9H321 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCX3BQ9H321 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCX3BQ9H321 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.81■□□□□ 0.6
VCX3BQ9H321 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCX3BQ9H321 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VCX3BQ9H321 AC018470.1-201ENST00000624790 3129 ntBASIC18.81■□□□□ 0.6
VCX3BQ9H321 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCX3BQ9H321 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCX3BQ9H321 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCX3BQ9H321 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.81■□□□□ 0.6
VCX3BQ9H321 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VCX3BQ9H321 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.81■□□□□ 0.6
VCX3BQ9H321 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.81■□□□□ 0.6
VCX3BQ9H321 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms