Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.72■■□□□ 1.07
VPS16Q9H269 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.72■■□□□ 1.07
VPS16Q9H269 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
VPS16Q9H269 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.72■■□□□ 1.07
VPS16Q9H269 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.72■■□□□ 1.07
VPS16Q9H269 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.72■■□□□ 1.07
VPS16Q9H269 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.72■■□□□ 1.07
VPS16Q9H269 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.72■■□□□ 1.07
VPS16Q9H269 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.72■■□□□ 1.07
VPS16Q9H269 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.72■■□□□ 1.07
VPS16Q9H269 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VPS16Q9H269 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.72■■□□□ 1.07
VPS16Q9H269 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.72■■□□□ 1.07
VPS16Q9H269 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.72■■□□□ 1.07
VPS16Q9H269 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VPS16Q9H269 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS16Q9H269 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.71■■□□□ 1.07
VPS16Q9H269 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS16Q9H269 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
VPS16Q9H269 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.71■■□□□ 1.07
VPS16Q9H269 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS16Q9H269 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS16Q9H269 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS16Q9H269 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS16Q9H269 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.71■■□□□ 1.07
VPS16Q9H269 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.71■■□□□ 1.07
VPS16Q9H269 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.71■■□□□ 1.07
VPS16Q9H269 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VPS16Q9H269 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.71■■□□□ 1.07
VPS16Q9H269 AC069236.1-201ENST00000604339 616 ntBASIC21.71■■□□□ 1.07
VPS16Q9H269 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.71■■□□□ 1.07
VPS16Q9H269 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.71■■□□□ 1.07
VPS16Q9H269 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VPS16Q9H269 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.71■■□□□ 1.07
VPS16Q9H269 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.71■■□□□ 1.07
VPS16Q9H269 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS16Q9H269 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VPS16Q9H269 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.71■■□□□ 1.07
VPS16Q9H269 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS16Q9H269 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.71■■□□□ 1.07
VPS16Q9H269 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VPS16Q9H269 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS16Q9H269 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.71■■□□□ 1.07
VPS16Q9H269 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
VPS16Q9H269 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS16Q9H269 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.7■■□□□ 1.06
VPS16Q9H269 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
VPS16Q9H269 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS16Q9H269 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.7■■□□□ 1.06
VPS16Q9H269 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
VPS16Q9H269 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS16Q9H269 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.7■■□□□ 1.06
VPS16Q9H269 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.7■■□□□ 1.06
VPS16Q9H269 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS16Q9H269 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS16Q9H269 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS16Q9H269 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS16Q9H269 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS16Q9H269 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS16Q9H269 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS16Q9H269 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS16Q9H269 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
VPS16Q9H269 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS16Q9H269 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS16Q9H269 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS16Q9H269 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.69■■□□□ 1.06
VPS16Q9H269 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS16Q9H269 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS16Q9H269 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.69■■□□□ 1.06
VPS16Q9H269 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS16Q9H269 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
VPS16Q9H269 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.69■■□□□ 1.06
VPS16Q9H269 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
VPS16Q9H269 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS16Q9H269 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS16Q9H269 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
VPS16Q9H269 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.69■■□□□ 1.06
VPS16Q9H269 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.69■■□□□ 1.06
VPS16Q9H269 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.69■■□□□ 1.06
VPS16Q9H269 BID-214ENST00000617586 542 ntTSL 5 BASIC21.69■■□□□ 1.06
VPS16Q9H269 AC008694.1-202ENST00000636953 945 ntBASIC21.69■■□□□ 1.06
VPS16Q9H269 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS16Q9H269 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS16Q9H269 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS16Q9H269 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.69■■□□□ 1.06
VPS16Q9H269 AP001271.2-201ENST00000624018 1556 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms