Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 AF201337.1-201ENST00000520239 748 ntBASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 AC105036.2-201ENST00000569468 176 ntBASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 AC133552.2-202ENST00000575694 574 ntBASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
NUCKS1Q9H1E3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 AC093787.1-201ENST00000450396 207 ntBASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NUCKS1Q9H1E3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 AC069236.1-201ENST00000604339 616 ntBASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
NUCKS1Q9H1E3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 TSPY6P-201ENST00000448518 926 ntBASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 AC008694.1-202ENST00000636953 945 ntBASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NUCKS1Q9H1E3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 AC023632.3-201ENST00000521633 145 ntBASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 CYP2T3P-201ENST00000601990 817 ntBASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 OR10C1-204ENST00000622521 1039 ntBASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 Z82202.1-201ENST00000623446 1880 ntBASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms