Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RASSF1-AS1-201ENST00000629828 790 ntBASIC13.19□□□□□ -0.3
LITAFQ99732 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.19□□□□□ -0.3
LITAFQ99732 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.19□□□□□ -0.3
LITAFQ99732 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LITAFQ99732 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC13.19□□□□□ -0.3
LITAFQ99732 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LITAFQ99732 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
LITAFQ99732 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.18□□□□□ -0.3
LITAFQ99732 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.18□□□□□ -0.3
LITAFQ99732 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LITAFQ99732 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.18□□□□□ -0.3
LITAFQ99732 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 POU5F1P4-201ENST00000413175 1085 ntBASIC13.18□□□□□ -0.3
LITAFQ99732 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC13.18□□□□□ -0.3
LITAFQ99732 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.18□□□□□ -0.3
LITAFQ99732 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.18□□□□□ -0.3
LITAFQ99732 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.18□□□□□ -0.3
LITAFQ99732 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LITAFQ99732 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LITAFQ99732 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LITAFQ99732 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LITAFQ99732 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LITAFQ99732 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.17□□□□□ -0.3
LITAFQ99732 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LITAFQ99732 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LITAFQ99732 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LITAFQ99732 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LITAFQ99732 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.17□□□□□ -0.3
LITAFQ99732 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
LITAFQ99732 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LITAFQ99732 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.17□□□□□ -0.3
LITAFQ99732 AC093525.10-201ENST00000625130 1569 ntBASIC13.17□□□□□ -0.3
LITAFQ99732 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LITAFQ99732 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
LITAFQ99732 AC239859.2-201ENST00000444165 318 ntBASIC13.17□□□□□ -0.3
LITAFQ99732 UNC93B8-201ENST00000511903 705 ntBASIC13.17□□□□□ -0.3
LITAFQ99732 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.17□□□□□ -0.3
LITAFQ99732 AC011298.3-201ENST00000615796 283 ntBASIC13.17□□□□□ -0.3
LITAFQ99732 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.17□□□□□ -0.3
LITAFQ99732 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.17□□□□□ -0.3
LITAFQ99732 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.17□□□□□ -0.3
LITAFQ99732 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LITAFQ99732 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LITAFQ99732 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC13.17□□□□□ -0.3
LITAFQ99732 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LITAFQ99732 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LITAFQ99732 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LITAFQ99732 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LITAFQ99732 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.17□□□□□ -0.3
LITAFQ99732 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.16□□□□□ -0.3
LITAFQ99732 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.16□□□□□ -0.3
LITAFQ99732 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.16□□□□□ -0.3
LITAFQ99732 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LITAFQ99732 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LITAFQ99732 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LITAFQ99732 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LITAFQ99732 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LITAFQ99732 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LITAFQ99732 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LITAFQ99732 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LITAFQ99732 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
LITAFQ99732 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LITAFQ99732 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.16□□□□□ -0.3
LITAFQ99732 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LITAFQ99732 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LITAFQ99732 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC13.16□□□□□ -0.3
LITAFQ99732 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC13.16□□□□□ -0.3
LITAFQ99732 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LITAFQ99732 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LITAFQ99732 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.16□□□□□ -0.3
LITAFQ99732 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms