Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.57■□□□□ 0.88
CDK5RAP1Q96SZ6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP1Q96SZ6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.57■□□□□ 0.88
CDK5RAP1Q96SZ6 Z99916.2-201ENST00000604037 246 ntBASIC20.57■□□□□ 0.88
CDK5RAP1Q96SZ6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.57■□□□□ 0.88
CDK5RAP1Q96SZ6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP1Q96SZ6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP1Q96SZ6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.57■□□□□ 0.88
CDK5RAP1Q96SZ6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP1Q96SZ6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
CDK5RAP1Q96SZ6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 HTR7P1-201ENST00000538670 1336 ntBASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 AL512408.1-201ENST00000569378 2000 ntBASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDK5RAP1Q96SZ6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 AL049637.2-201ENST00000641778 930 ntBASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDK5RAP1Q96SZ6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 AL353708.3-201ENST00000610272 989 ntBASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDK5RAP1Q96SZ6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.52■□□□□ 0.88
CDK5RAP1Q96SZ6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms