Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 AL356652.1-201ENST00000615962 565 ntBASIC18.67■□□□□ 0.58
NSMCE2Q96MF7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NSMCE2Q96MF7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NSMCE2Q96MF7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NSMCE2Q96MF7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NSMCE2Q96MF7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.67■□□□□ 0.58
NSMCE2Q96MF7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NSMCE2Q96MF7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NSMCE2Q96MF7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NSMCE2Q96MF7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NSMCE2Q96MF7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 NEFHP1-201ENST00000412845 2629 ntBASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 AL031432.3-201ENST00000607698 485 ntBASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 AC008406.3-201ENST00000620001 1374 ntBASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 AC087633.2-202ENST00000565166 1439 ntBASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NSMCE2Q96MF7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NSMCE2Q96MF7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
NSMCE2Q96MF7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NSMCE2Q96MF7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NSMCE2Q96MF7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NSMCE2Q96MF7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.63■□□□□ 0.57
NSMCE2Q96MF7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.63■□□□□ 0.57
NSMCE2Q96MF7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.63■□□□□ 0.57
NSMCE2Q96MF7 SLC7A5P1-201ENST00000568957 537 ntBASIC18.63■□□□□ 0.57
NSMCE2Q96MF7 AC131212.1-201ENST00000613771 668 ntBASIC18.63■□□□□ 0.57
NSMCE2Q96MF7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms